tasks/bio

@@ -763,9 +763,7 @@ Recommends: oases
 
 Recommends: obitools
 
-Recommends: porechop
-
-Recommends: r-other-apmswapp
+Recommends: paipline
 
 Recommends: pal2nal
 
@@ -826,24 +824,28 @@ Recommends: phyutility
 
 Recommends: phyx
 
+Recommends: physamp
+
 Recommends: piler
 
 Recommends: pilon
 
 Recommends: pipasic, inspect, tide
 
-Recommends: physamp
-
 Recommends: pirs
 
 Recommends: placnet
 
+Recommends: plasmidseeker
+
 Recommends: plato
 
 Recommends: plip
 
 Recommends: poretools
 
+Recommends: porechop
+
 Recommends: prank
 
 Recommends: predictprotein
@@ -906,7 +908,7 @@ Suggests: r-bioc-annotationhub, r-bioc-aroma.light, r-bioc-ensembldb, r-bioc-go.
 
 Suggests: r-bioc-savr
 
-Recommends: r-bioc-tfbstools
+Recommends: r-bioc-tfbstools, r-bioc-cner
 
 Recommends: r-cran-metamix
 
@@ -936,6 +938,8 @@ Suggests: r-cran-pheatmap
 
 Recommends: r-other-hms-dbmi-spp
 
+Recommends: r-other-apmswapp
+
 Recommends: relion-bin+gui | relion-bin+mpi+gui, relion-bin | relion-bin+mpi
 
 Recommends: rdp-alignment, rdp-readseq, rdp-classifier