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Commits on Source (2)
Add manpages for new executables.
· 39e54805
Bas Couwenberg
authored
Jun 08, 2018
39e54805
Add patch to fix spelling errors.
· 935da815
Bas Couwenberg
authored
Jun 08, 2018
935da815
Show whitespace changes
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debian/changelog
View file @
935da815
otb (6.6.0~rc2+dfsg-1~exp2) UNRELEASED; urgency=medium
* Update symbols for amd64 & i386.
* Add manpages for new executables.
* Add patch to fix spelling errors.
-- Bas Couwenberg <sebastic@debian.org> Thu, 07 Jun 2018 23:12:47 +0200
...
...
debian/libotb-apps.lintian-overrides
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935da815
# False positive, string not included in source.
spelling-error-in-binary * Verticies Vertices
spelling-error-in-binary * scaleable scalable
debian/manpages/otbcli_ImageDimensionalityReduction.1
0 → 100644
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935da815
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6.
.TH OTBCLI_IMAGEDIMENSIONALITYREDUCTION "1" "June 2018" "otbcli_ImageDimensionalityReduction 6.6.0" "User Commands"
.SH NAME
otbcli_ImageDimensionalityReduction \- OTB ImageDimensionalityReduction application
.SH DESCRIPTION
This is the Image Dimensionality Reduction (ImageDimensionalityReduction) application, version 6.6.0
.PP
Performs dimensionality reduction of the input image according to a dimensionality reduction model file.
Parameters:
\fB\-in\fR <string> Input Image (mandatory)
.TP
\fB\-mask\fR
<string> Input Mask (optional, off by default)
.PP
\fB\-model\fR <string> Model file (mandatory)
.TP
\fB\-imstat\fR
<string> Statistics file (optional, off by default)
.PP
\fB\-out\fR <string> [pixel] Output Image [pixel=uint8/uint16/int16/uint32/int32/float/double/cint16/cint32/cfloat/cdouble] (default value is float) (mandatory)
.TP
\fB\-ram\fR
<int32> Available RAM (Mb) (optional, off by default, default value is 128)
.TP
\fB\-inxml\fR
<string> Load otb application from xml file (optional, off by default)
.TP
\fB\-progress\fR <boolean>
Report progress
.TP
\fB\-help\fR
<string list> Display long help (empty list), or help for given parameters keys
.PP
Use \fB\-help\fR param1 [... paramN] to see detailed documentation of those parameters.
.SH EXAMPLES
otbcli_ImageDimensionalityReduction \-in QB_1_ortho.tif \-imstat EstimateImageStatisticsQB1.xml \-model clsvmModelQB1.model \-out ReducedImageQB1.tif
debian/manpages/otbcli_TrainDimensionalityReduction.1
0 → 100644
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935da815
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6.
.TH OTBCLI_TRAINDIMENSIONALITYREDUCTION "1" "June 2018" "otbcli_TrainDimensionalityReduction 6.6.0" "User Commands"
.SH NAME
otbcli_TrainDimensionalityReduction \- OTB TrainDimensionalityReduction application
.SH DESCRIPTION
This is the Train Dimensionality Reduction (TrainDimensionalityReduction) application, version 6.6.0
.PP
Train a dimensionality reduction model
Parameters:
.TP
\fB\-io\fR
<group> Input and output data
.PP
\fB\-io\fR.vd <string> Input Vector Data (mandatory)
\fB\-io\fR.out <string> Output model (mandatory)
.TP
\fB\-io\fR.stats
<string> Input XML image statistics file (optional, off by default)
.PP
\fB\-feat\fR <string list> Field names to be used for training. (mandatory)
.TP
\fB\-algorithm\fR
<string> algorithm to use for the training [som/autoencoder/pca] (mandatory, default value is som)
.TP
\fB\-algorithm\fR.som.s
<string list> Map size (optional, off by default, default value is 10
.PP
10
)
.TP
\fB\-algorithm\fR.som.n
<string list> Neighborhood sizes (optional, off by default, default value is 3
.PP
3
)
.TP
\fB\-algorithm\fR.som.ni
<int32> NumberIteration (optional, off by default, default value is 5)
.TP
\fB\-algorithm\fR.som.bi
<float> BetaInit (optional, off by default, default value is 1)
.TP
\fB\-algorithm\fR.som.bf
<float> BetaFinal (optional, off by default, default value is 0.1)
.TP
\fB\-algorithm\fR.som.iv
<float> InitialValue (optional, off by default, default value is 10)
.TP
\fB\-algorithm\fR.autoencoder.nbiter
<int32> Maximum number of iterations during training (mandatory, default value is 100)
.TP
\fB\-algorithm\fR.autoencoder.nbiterfinetuning <int32>
Maximum number of iterations during training (mandatory, default value is 0)
.TP
\fB\-algorithm\fR.autoencoder.epsilon
<float> Epsilon (mandatory, default value is 0)
.TP
\fB\-algorithm\fR.autoencoder.initfactor
<float> Weight initialization factor (mandatory, default value is 1)
.TP
\fB\-algorithm\fR.autoencoder.nbneuron
<string list> Size (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.regularization
<string list> Strength of the regularization (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.noise
<string list> Strength of the noise (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.rho
<string list> Sparsity parameter (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.beta
<string list> Sparsity regularization strength (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.learningcurve
<string> Learning curve (optional, off by default)
.TP
\fB\-algorithm\fR.pca.dim
<int32> Dimension of the output of the pca transformation (mandatory, default value is 10)
.TP
\fB\-ram\fR
<int32> Available RAM (Mb) (optional, off by default, default value is 128)
.TP
\fB\-inxml\fR
<string> Load otb application from xml file (optional, off by default)
.TP
\fB\-progress\fR
<boolean> Report progress
.TP
\fB\-help\fR
<string list> Display long help (empty list), or help for given parameters keys
.PP
Use \fB\-help\fR param1 [... paramN] to see detailed documentation of those parameters.
.SH EXAMPLES
otbcli_TrainDimensionalityReduction \-io.vd cuprite_samples.sqlite \-io.out mode.ae \-algorithm pca \-algorithm.pca.dim 8 \-feat value_0 value_1 value_2 value_3 value_4 value_5 value_6 value_7 value_8 value_9
debian/manpages/otbcli_VectorDimensionalityReduction.1
0 → 100644
View file @
935da815
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6.
.TH OTBCLI_VECTORDIMENSIONALITYREDUCTION "1" "June 2018" "otbcli_VectorDimensionalityReduction 6.6.0" "User Commands"
.SH NAME
otbcli_VectorDimensionalityReduction \- OTB VectorDimensionalityReduction application
.SH DESCRIPTION
This is the Vector Dimensionality Reduction (VectorDimensionalityReduction) application, version 6.6.0
.PP
Performs dimensionality reduction of the input vector data according to a model file.
Parameters:
\fB\-in\fR <string> Name of the input vector data (mandatory)
.TP
\fB\-instat\fR
<string> Statistics file (optional, off by default)
.PP
\fB\-model\fR <string> Model file (mandatory)
.TP
\fB\-out\fR
<string> Output vector data file containing the reduced vector (optional, off by default)
.TP
\fB\-feat\fR
<string list> Input features to use for reduction. (mandatory, no default value)
.TP
\fB\-featout\fR
<string> Output feature [prefix/list] (mandatory, default value is prefix)
.TP
\fB\-featout\fR.prefix.name <string>
Feature name prefix (mandatory, default value is reduced_)
.TP
\fB\-featout\fR.list.names
<string list> Feature name list (mandatory)
.TP
\fB\-pcadim\fR
<int32> Principal component dimension (optional, off by default)
.TP
\fB\-mode\fR
<string> Writing mode [overwrite/update] (mandatory, default value is overwrite)
.TP
\fB\-inxml\fR
<string> Load otb application from xml file (optional, off by default)
.TP
\fB\-progress\fR
<boolean> Report progress
.TP
\fB\-help\fR
<string list> Display long help (empty list), or help for given parameters keys
.PP
Use \fB\-help\fR param1 [... paramN] to see detailed documentation of those parameters.
.SH EXAMPLES
otbcli_VectorDimensionalityReduction \-in vectorData.shp \-instat meanVar.xml \-model model.txt \-out vectorDataOut.shp \-feat perimeter area width
debian/manpages/otbgui_ImageDimensionalityReduction.1
0 → 100644
View file @
935da815
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6.
.TH OTBGUI_IMAGEDIMENSIONALITYREDUCTION "1" "June 2018" "otbgui_ImageDimensionalityReduction 6.6.0" "User Commands"
.SH NAME
otbgui_ImageDimensionalityReduction \- OTB ImageDimensionalityReduction application
.SH DESCRIPTION
This is the Image Dimensionality Reduction (ImageDimensionalityReduction) application, version 6.6.0
.PP
Performs dimensionality reduction of the input image according to a dimensionality reduction model file.
Parameters:
\fB\-in\fR <string> Input Image (mandatory)
.TP
\fB\-mask\fR
<string> Input Mask (optional, off by default)
.PP
\fB\-model\fR <string> Model file (mandatory)
.TP
\fB\-imstat\fR
<string> Statistics file (optional, off by default)
.PP
\fB\-out\fR <string> [pixel] Output Image [pixel=uint8/uint16/int16/uint32/int32/float/double/cint16/cint32/cfloat/cdouble] (default value is float) (mandatory)
.TP
\fB\-ram\fR
<int32> Available RAM (Mb) (optional, off by default, default value is 128)
.TP
\fB\-inxml\fR
<string> Load otb application from xml file (optional, off by default)
.TP
\fB\-progress\fR <boolean>
Report progress
.TP
\fB\-help\fR
<string list> Display long help (empty list), or help for given parameters keys
.PP
Use \fB\-help\fR param1 [... paramN] to see detailed documentation of those parameters.
.SH EXAMPLES
otbgui_ImageDimensionalityReduction \-in QB_1_ortho.tif \-imstat EstimateImageStatisticsQB1.xml \-model clsvmModelQB1.model \-out ReducedImageQB1.tif
debian/manpages/otbgui_TrainDimensionalityReduction.1
0 → 100644
View file @
935da815
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6.
.TH OTBGUI_TRAINDIMENSIONALITYREDUCTION "1" "June 2018" "otbgui_TrainDimensionalityReduction 6.6.0" "User Commands"
.SH NAME
otbgui_TrainDimensionalityReduction \- OTB TrainDimensionalityReduction application
.SH DESCRIPTION
This is the Train Dimensionality Reduction (TrainDimensionalityReduction) application, version 6.6.0
.PP
Train a dimensionality reduction model
Parameters:
.TP
\fB\-io\fR
<group> Input and output data
.PP
\fB\-io\fR.vd <string> Input Vector Data (mandatory)
\fB\-io\fR.out <string> Output model (mandatory)
.TP
\fB\-io\fR.stats
<string> Input XML image statistics file (optional, off by default)
.PP
\fB\-feat\fR <string list> Field names to be used for training. (mandatory)
.TP
\fB\-algorithm\fR
<string> algorithm to use for the training [som/autoencoder/pca] (mandatory, default value is som)
.TP
\fB\-algorithm\fR.som.s
<string list> Map size (optional, off by default, default value is 10
.PP
10
)
.TP
\fB\-algorithm\fR.som.n
<string list> Neighborhood sizes (optional, off by default, default value is 3
.PP
3
)
.TP
\fB\-algorithm\fR.som.ni
<int32> NumberIteration (optional, off by default, default value is 5)
.TP
\fB\-algorithm\fR.som.bi
<float> BetaInit (optional, off by default, default value is 1)
.TP
\fB\-algorithm\fR.som.bf
<float> BetaFinal (optional, off by default, default value is 0.1)
.TP
\fB\-algorithm\fR.som.iv
<float> InitialValue (optional, off by default, default value is 10)
.TP
\fB\-algorithm\fR.autoencoder.nbiter
<int32> Maximum number of iterations during training (mandatory, default value is 100)
.TP
\fB\-algorithm\fR.autoencoder.nbiterfinetuning <int32>
Maximum number of iterations during training (mandatory, default value is 0)
.TP
\fB\-algorithm\fR.autoencoder.epsilon
<float> Epsilon (mandatory, default value is 0)
.TP
\fB\-algorithm\fR.autoencoder.initfactor
<float> Weight initialization factor (mandatory, default value is 1)
.TP
\fB\-algorithm\fR.autoencoder.nbneuron
<string list> Size (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.regularization
<string list> Strength of the regularization (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.noise
<string list> Strength of the noise (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.rho
<string list> Sparsity parameter (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.beta
<string list> Sparsity regularization strength (mandatory)
.TP
\fB\-algorithm\fR.autoencoder.learningcurve
<string> Learning curve (optional, off by default)
.TP
\fB\-algorithm\fR.pca.dim
<int32> Dimension of the output of the pca transformation (mandatory, default value is 10)
.TP
\fB\-ram\fR
<int32> Available RAM (Mb) (optional, off by default, default value is 128)
.TP
\fB\-inxml\fR
<string> Load otb application from xml file (optional, off by default)
.TP
\fB\-progress\fR
<boolean> Report progress
.TP
\fB\-help\fR
<string list> Display long help (empty list), or help for given parameters keys
.PP
Use \fB\-help\fR param1 [... paramN] to see detailed documentation of those parameters.
.SH EXAMPLES
otbgui_TrainDimensionalityReduction \-io.vd cuprite_samples.sqlite \-io.out mode.ae \-algorithm pca \-algorithm.pca.dim 8 \-feat value_0 value_1 value_2 value_3 value_4 value_5 value_6 value_7 value_8 value_9
debian/manpages/otbgui_VectorDimensionalityReduction.1
0 → 100644
View file @
935da815
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6.
.TH OTBGUI_VECTORDIMENSIONALITYREDUCTION "1" "June 2018" "otbgui_VectorDimensionalityReduction 6.6.0" "User Commands"
.SH NAME
otbgui_VectorDimensionalityReduction \- OTB VectorDimensionalityReduction application
.SH DESCRIPTION
This is the Vector Dimensionality Reduction (VectorDimensionalityReduction) application, version 6.6.0
.PP
Performs dimensionality reduction of the input vector data according to a model file.
Parameters:
\fB\-in\fR <string> Name of the input vector data (mandatory)
.TP
\fB\-instat\fR
<string> Statistics file (optional, off by default)
.PP
\fB\-model\fR <string> Model file (mandatory)
.TP
\fB\-out\fR
<string> Output vector data file containing the reduced vector (optional, off by default)
.TP
\fB\-feat\fR
<string list> Input features to use for reduction. (mandatory, no default value)
.TP
\fB\-featout\fR
<string> Output feature [prefix/list] (mandatory, default value is prefix)
.TP
\fB\-featout\fR.prefix.name <string>
Feature name prefix (mandatory, default value is reduced_)
.TP
\fB\-featout\fR.list.names
<string list> Feature name list (mandatory)
.TP
\fB\-pcadim\fR
<int32> Principal component dimension (optional, off by default)
.TP
\fB\-mode\fR
<string> Writing mode [overwrite/update] (mandatory, default value is overwrite)
.TP
\fB\-inxml\fR
<string> Load otb application from xml file (optional, off by default)
.TP
\fB\-progress\fR
<boolean> Report progress
.TP
\fB\-help\fR
<string list> Display long help (empty list), or help for given parameters keys
.PP
Use \fB\-help\fR param1 [... paramN] to see detailed documentation of those parameters.
.SH EXAMPLES
otbgui_VectorDimensionalityReduction \-in vectorData.shp \-instat meanVar.xml \-model model.txt \-out vectorDataOut.shp \-feat perimeter area width
debian/otb-bin-qt.manpages
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935da815
...
...
@@ -39,6 +39,7 @@ debian/manpages/otbgui_HomologousPointsExtraction.1
debian/manpages/otbgui_HooverCompareSegmentation.1
debian/manpages/otbgui_HyperspectralUnmixing.1
debian/manpages/otbgui_ImageClassifier.1
debian/manpages/otbgui_ImageDimensionalityReduction.1
debian/manpages/otbgui_ImageEnvelope.1
debian/manpages/otbgui_KMeansClassification.1
debian/manpages/otbgui_KmzExport.1
...
...
@@ -85,6 +86,7 @@ debian/manpages/otbgui_StereoRectificationGridGenerator.1
debian/manpages/otbgui_Superimpose.1
debian/manpages/otbgui_TestApplication.1
debian/manpages/otbgui_TileFusion.1
debian/manpages/otbgui_TrainDimensionalityReduction.1
debian/manpages/otbgui_TrainImagesClassifier.1
debian/manpages/otbgui_TrainOGRLayersClassifier.1
debian/manpages/otbgui_VectorClassifier.1
...
...
@@ -93,6 +95,7 @@ debian/manpages/otbgui_VectorDataExtractROI.1
debian/manpages/otbgui_VectorDataReprojection.1
debian/manpages/otbgui_VectorDataSetField.1
debian/manpages/otbgui_VectorDataTransform.1
debian/manpages/otbgui_VectorDimensionalityReduction.1
debian/manpages/otbgui_VertexComponentAnalysis.1
debian/manpages/otbgui_ManageNoData.1
debian/manpages/otbgui_PredictRegression.1
...
...
debian/otb-bin.manpages
View file @
935da815
...
...
@@ -39,6 +39,7 @@ debian/manpages/otbcli_HomologousPointsExtraction.1
debian/manpages/otbcli_HooverCompareSegmentation.1
debian/manpages/otbcli_HyperspectralUnmixing.1
debian/manpages/otbcli_ImageClassifier.1
debian/manpages/otbcli_ImageDimensionalityReduction.1
debian/manpages/otbcli_ImageEnvelope.1
debian/manpages/otbcli_KMeansClassification.1
debian/manpages/otbcli_KmzExport.1
...
...
@@ -86,6 +87,7 @@ debian/manpages/otbcli_Superimpose.1
debian/manpages/otbcli_TestApplication.1
debian/manpages/otbcli_TileFusion.1
debian/manpages/otbcli_TrainImagesClassifier.1
debian/manpages/otbcli_TrainDimensionalityReduction.1
debian/manpages/otbcli_TrainOGRLayersClassifier.1
debian/manpages/otbcli_VectorClassifier.1
debian/manpages/otbcli_VectorDataDSValidation.1
...
...
@@ -93,6 +95,7 @@ debian/manpages/otbcli_VectorDataExtractROI.1
debian/manpages/otbcli_VectorDataReprojection.1
debian/manpages/otbcli_VectorDataSetField.1
debian/manpages/otbcli_VectorDataTransform.1
debian/manpages/otbcli_VectorDimensionalityReduction.1
debian/manpages/otbcli_VertexComponentAnalysis.1
debian/manpages/otbcli_ManageNoData.1
debian/manpages/otbcli_PredictRegression.1
...
...
debian/patches/series
0 → 100644
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935da815
spelling-errors.patch
debian/patches/spelling-errors.patch
0 → 100644
View file @
935da815
Description: Fix spelling errors.
* Writting -> Writing
Author: Bas Couwenberg <sebastic@debian.org>
Forwarded: https://gitlab.orfeo-toolbox.org/orfeotoolbox/otb/issues/1633
--- a/Modules/Applications/AppDimensionalityReduction/app/otbVectorDimensionalityReduction.cxx
+++ b/Modules/Applications/AppDimensionalityReduction/app/otbVectorDimensionalityReduction.cxx
@@ -143,7 +143,7 @@
private:
"parameter can't be used for other models"); //
MandatoryOff("pcadim");
- AddParameter(ParameterType_Choice, "mode", "Writting mode"); //
+ AddParameter(ParameterType_Choice, "mode", "Writing mode"); //
SetParameterDescription("mode", "This parameter determines if the output "
"file is overwritten or updated [overwrite/update]. If an output file "
"name is given, the original file is copied before creating the new features.");
@@ -325,7 +325,7 @@
private:
else
{
otbAppLogFATAL(<< "Error when creating the output file" <<
- GetParameterString("mode") << " : unsupported writting mode type");
+ GetParameterString("mode") << " : unsupported writing mode type");
}
}
--- a/Modules/Learning/DimensionalityReductionLearning/include/otbAutoencoderModel.h
+++ b/Modules/Learning/DimensionalityReductionLearning/include/otbAutoencoderModel.h
@@ -178,7 +178,7 @@
private:
itk::Array<double> m_Beta; // Sparsity regularization parameter
double m_InitFactor; // Weight initialization factor (the weights are intialized at m_initfactor/sqrt(inputDimension) )
- bool m_WriteLearningCurve; // Flag for writting the learning curve into a txt file
+ bool m_WriteLearningCurve; // Flag for writing the learning curve into a txt file
std::string m_LearningCurveFileName; // Name of the output learning curve printed after training
bool m_WriteWeights;
};