CMakeLists.txt

@@ -36,7 +36,7 @@ set (PROJECT_SOURCE_DIR src)
 # The version number.
 set (PKTOOLS_VERSION_MAJOR 2)
 set (PKTOOLS_VERSION_MINOR 6)
-set (PKTOOLS_VERSION_PATCH 7.5)
+set (PKTOOLS_VERSION_PATCH 7.6)
 set (PKTOOLS_VERSION "${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
 set (PKTOOLS_PACKAGE_VERSION "${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
 set (PKTOOLS_PACKAGE_STRING "PKTOOLS ${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
@@ -86,6 +86,7 @@ set(BUILD_WITH_LIBLAS FALSE CACHE BOOL "Choose if pktools is to be built with li
 set(BUILD_WITH_FANN FALSE CACHE BOOL "Choose if pktools is to be built with fann")
 #set(BUILD_WITH_NLOPT FALSE CACHE BOOL "Choose if pktools is to be built with nlopt")
 set(PKTOOLS_WITH_UTILITIES TRUE CACHE BOOL "Choose if pktools utilities should be built")
+option(INSTALL_LIBRARY_DIR "Install path for libraries" ${PROJECT_LIBRARY_DIR})
 
 set(GSL_INCLUDE_DIR /usr/include CACHE PATH "Include PATH for GSL")
 set(GSL_LIB_PATH /usr/lib CACHE PATH "Library PATH for GSL")
@@ -364,7 +365,8 @@ endif()
 #install (FILES "${PROJECT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
 #test
 install (FILES "${CMAKE_CURRENT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-install (FILES "pktools.pc" DESTINATION lib/pkgconfig PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
+install (FILES "pktools.pc" DESTINATION ${INSTALL_LIBRARY_DIR}/pkgconfig PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
+
 
 if (PKTOOLS_WITH_UTILITIES)
 	install (TARGETS ${PKUTILITIES} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)

CMakeLists.txt.orig

-###############################################################################
-#
-# CMake build scripts for PKTOOLS
-# 
-#
-# History
-# 2010/12/14 - Created by Peter Bunting for SPDLib
-# 2012/02/07 - Edited by Peter Bunting for PKTOOLS
-# 2014/11/22 - Edited by Peter Bunting for pktools
-# 2015/12/10 - Edited by Pieter Kempeneers and Kris Vanhoof
-# Change log
-# Find package lib
-# Boost: disable auto linking: add_definitions("-DBOOST_ALL_NO_LIB")
-# add cmake env variable Boost_COMPILER -vc110
-# FANN: create library CMake: add ADD_DEFINITIONS(-DFANN_DLL_EXPORTS)
-# GDAL: disabled macro for Visual Studio 2015
-#if defined(_MSC_VER) && (_MSC_VER < 1900)
-#  define snprintf _snprintf
-#endif
-#set CMAKE_INSTALL_PREFIX to C:/OSGeo4W64;C:/Users/kempenep/Downloads/FANN-2.2.0-Source/FANN-2.2.0-Source/install;C:/Users/kempenep/Downloads/armadillo-6.200.4/install;C:\Users\kempenep\Downloads\nlopt-2.4.2-dll64
-#
-###############################################################################
-cmake_minimum_required(VERSION 2.6.0)
-#cmake_minimum_required(VERSION 2.8)
-###############################################################################
-# Set Project name and version
-project (PKTOOLS)
-
-set (PROJECT_BINARY_DIR bin)
-set (PROJECT_LIBRARY_DIR lib)
-set (PROJECT_INCLUDE_DIR include/pktools)
-set (PROJECT_DOC_DIR doc)
-set (PROJECT_SOURCE_DIR src)
-
-# The version number.
-set (PKTOOLS_VERSION_MAJOR 2)
-set (PKTOOLS_VERSION_MINOR 6)
-set (PKTOOLS_VERSION_PATCH 7.4)
-set (PKTOOLS_VERSION "${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
-set (PKTOOLS_PACKAGE_VERSION "${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
-set (PKTOOLS_PACKAGE_STRING "PKTOOLS ${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
-set (PKTOOLS_PACKAGE_BUGREPORT "kempenep@gmail.com")
-set (PKTOOLS_PACKAGE "pktools")
-set (PKTOOLS_COPYRIGHT_YEAR 2016)
-
-set (PKTOOLS_BASE_VERSION_MAJOR 1)
-set (PKTOOLS_BASE_VERSION_MINOR 6)
-set (PKTOOLS_BASE_VERSION_PATCH 1)
-set (PKTOOLS_BASE_VERSION "${PKTOOLS_BASE_VERSION_MAJOR}.${PKTOOLS_BASE_VERSION_MINOR}.${PKTOOLS_BASE_VERSION_PATCH}")
-set (PKTOOLS_BASE_SOVERSION 1)
-
-set (PKTOOLS_ALGORITHMS_VERSION_MAJOR 1)
-set (PKTOOLS_ALGORITHMS_VERSION_MINOR 6)
-set (PKTOOLS_ALGORITHMS_VERSION_PATCH 1)
-set (PKTOOLS_ALGORITHMS_VERSION "${PKTOOLS_ALGORITHMS_VERSION_MAJOR}.${PKTOOLS_ALGORITHMS_VERSION_MINOR}.${PKTOOLS_ALGORITHMS_VERSION_PATCH}")
-set (PKTOOLS_ALGORITHMS_SOVERSION 1)
-
-set (PKTOOLS_FILECLASSES_VERSION_MAJOR 1)
-set (PKTOOLS_FILECLASSES_VERSION_MINOR 6)
-set (PKTOOLS_FILECLASSES_VERSION_PATCH 1)
-set (PKTOOLS_FILECLASSES_VERSION "${PKTOOLS_FILECLASSES_VERSION_MAJOR}.${PKTOOLS_FILECLASSES_VERSION_MINOR}.${PKTOOLS_FILECLASSES_VERSION_PATCH}")
-set (PKTOOLS_FILECLASSES_SOVERSION 1)
-
-set (PKTOOLS_IMAGECLASSES_VERSION_MAJOR 1)
-set (PKTOOLS_IMAGECLASSES_VERSION_MINOR 6)
-set (PKTOOLS_IMAGECLASSES_VERSION_PATCH 1)
-set (PKTOOLS_IMAGECLASSES_VERSION "${PKTOOLS_IMAGECLASSES_VERSION_MAJOR}.${PKTOOLS_IMAGECLASSES_VERSION_MINOR}.${PKTOOLS_IMAGECLASSES_VERSION_PATCH}")
-set (PKTOOLS_IMAGECLASSES_SOVERSION 1)
-
-set (PKTOOLS_LASCLASSES_VERSION_MAJOR 1)
-set (PKTOOLS_LASCLASSES_VERSION_MINOR 6)
-set (PKTOOLS_LASCLASSES_VERSION_PATCH 1)
-set (PKTOOLS_LASCLASSES_VERSION "${PKTOOLS_LASCLASSES_VERSION_MAJOR}.${PKTOOLS_LASCLASSES_VERSION_MINOR}.${PKTOOLS_LASCLASSES_VERSION_PATCH}")
-set (PKTOOLS_LASCLASSES_SOVERSION 1)
-
-# Name of C++ library
-set(PKTOOLS_BASE_LIB_NAME base)
-set(PKTOOLS_ALGORITHMS_LIB_NAME algorithms)
-set(PKTOOLS_FILECLASSES_LIB_NAME fileClasses)
-set(PKTOOLS_IMAGECLASSES_LIB_NAME imageClasses)
-set(PKTOOLS_LASCLASSES_LIB_NAME lasClasses)
-
-option (BUILD_SHARED_LIBS "Build with shared library" OFF)
-set(BUILD_WITH_LIBLAS FALSE CACHE BOOL "Choose if pktools is to be built with liblas")
-set(BUILD_WITH_FANN FALSE CACHE BOOL "Choose if pktools is to be built with fann")
-#set(BUILD_WITH_NLOPT FALSE CACHE BOOL "Choose if pktools is to be built with nlopt")
-set(PKTOOLS_WITH_UTILITIES TRUE CACHE BOOL "Choose if pktools utilities should be built")
-
-set(GSL_INCLUDE_DIR /usr/include CACHE PATH "Include PATH for GSL")
-set(GSL_LIB_PATH /usr/lib CACHE PATH "Library PATH for GSL")
-
-###############################################################################
-
-###############################################################################
-# CMake settings
-# cmake_minimum_required(VERSION 2.6.0)
-
-IF(NOT CMAKE_BUILD_TYPE)
-  #SET(CMAKE_BUILD_TYPE "DEBUG")
-  SET(CMAKE_BUILD_TYPE "RELEASE")
-  #SET(CMAKE_BUILD_TYPE "RELWITHDEBINFO")
-  #SET(CMAKE_BUILD_TYPE "MINSIZEREL")
-ENDIF()
-
-set(CMAKE_COLOR_MAKEFILE ON)
-
-# Allow advanced users to generate Makefiles printing detailed commands
-mark_as_advanced(CMAKE_VERBOSE_MAKEFILE)
-
-# Path to additional CMake modules
-list(APPEND CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/cmake/modules)
-###############################################################################
-
-###############################################################################
-# Setup configure file
-configure_file ( "cmake-config.h.in" "${CMAKE_CURRENT_BINARY_DIR}/base/config.h" @ONLY)
-include_directories("${CMAKE_CURRENT_BINARY_DIR}/base")
-add_definitions(-DHAVE_CONFIG_H)
-###############################################################################
-
-###############################################################################
-# Documentation
-#file(READ "doc/index.txt" README )
-file(WRITE "README.txt" "${README}")
-###############################################################################
-
-###############################################################################
-# Platform and compiler specific settings
-
-if(WIN32)
-    if (MSVC)
-        if (MSVC80 OR MSVC90 OR MSVC10)
-            add_definitions(-D_CRT_SECURE_NO_DEPRECATE)
-            add_definitions(-D_CRT_SECURE_NO_WARNINGS)
-            add_definitions(-D_CRT_NONSTDC_NO_WARNING)
-            add_definitions(-D_SCL_SECURE_NO_WARNINGS)
-        endif()
-        if(CMAKE_CXX_FLAGS MATCHES "/W[0-4]")
-            string(REGEX REPLACE "/W[0-4]" "/W4"
-                   CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS}")
-        else()
-            set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} /W4")
-        endif()
-
-        # Generate dot-user file with user-specific settings for Visual Studio project
-        set(MSVC_ENVIRONMENT_PATH "" CACHE STRING
-            "Custom PATH for Environment property in Visual Studio project configuration")
-        mark_as_advanced(MSVC_ENVIRONMENT_PATH)
-        set(VCPROJ_USER_ENVIRONMENT_PATH_DEBUG "${ENVIRONMENT_PATH}")
-        mark_as_advanced(VCPROJ_USER_ENVIRONMENT_PATH_DEBUG)
-
-    endif()
-
-	set(CMAKE_INCLUDE_PATH c:/osgeo4w/include;$ENV{CMAKE_INCLUDE_PATH})
-    set(CMAKE_LIBRARY_PATH c:/osgeo4w/lib;$ENV{CMAKE_LIBRARY_PATH})
-else()
-  # Recommended C++ compilation flags
-  # -Weffc++
-  set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pg")
-  set(PKTOOLS_COMMON_CXX_FLAGS
-    "-Wall -Wpointer-arith -Wcast-align -Wcast-qual -Wredundant-decls -Wno-long-long")
-
-  if(CMAKE_COMPILER_IS_GNUCC OR CMAKE_COMPILER_IS_GNUCXX)
-
-    set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fPIC ${PKTOOLS_COMMON_CXX_FLAGS}")
-    if (CMAKE_COMPILER_IS_GNUCXX)
-      set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++98")
-    endif()
-
-  elseif("${CMAKE_CXX_COMPILER_ID}" MATCHES "Clang" OR "${CMAKE_CXX_COMPILER}" MATCHES "clang")
-    set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${PKTOOLS_COMMON_CXX_FLAGS}")
-  endif()
-endif(WIN32)
-
-if (APPLE)
-  set(SO_EXT dylib)
- # set(CMAKE_FIND_FRAMEWORK "LAST")
-elseif(WIN32)
-  set(SO_EXT dll)
-else()
-  set(SO_EXT so)
-endif(APPLE)
-###############################################################################
-
-###############################################################################
-# Check the required libraries are present
-
-#include_directories(${GDAL_INCLUDE_DIR})
-#if (MSVC)
-#  set(GDAL_LIBRARIES -LIBPATH:${GDAL_LIB_PATH} gdal_i.lib)
-#else()
-#  set(GDAL_LIBRARIES -L${GDAL_LIB_PATH} -lgdal)
-#endif(MSVC)
-
-find_package(GDAL 1.10 REQUIRED)
-if(GDAL_FOUND)
-	include_directories(${GDAL_INCLUDE_DIRS})
-endif()
-
-find_package(GSL REQUIRED)
-if(GSL_FOUND)
-  include_directories(${GSL_INCLUDE_DIRS})
-  add_definitions(-DGSL_DLL)
-endif()
-
-find_package(Armadillo REQUIRED)
-if(ARMADILLO_FOUND)
-	include_directories(${ARMADILLO_INCLUDE_DIRS})
-endif()
-
-if (BUILD_WITH_LIBLAS)
-	find_package(LIBLAS)
-	if(LIBLAS_FOUND)
-	  include_directories(${LIBLAS_INCLUDE_DIRS})
-	endif()
-	set(Boost_DEBUG 0)
-	find_package(Boost COMPONENTS filesystem system)
-	if(Boost_FOUND)
-		include_directories(${Boost_INCLUDE_DIRS})
-		add_definitions("-DBOOST_ALL_NO_LIB")
-	endif()
-#	include_directories(${BOOST_INCLUDE_DIR})
-#	if (MSVC)
-#		set(BOOST_LIBRARIES -LIBPATH:${BOOST_LIB_PATH} libboost_filesystem-vc100-mt-1_56.lib libboost_system-vc100-mt-1_56.lib)
-#	else()
-#		set(BOOST_LIBRARIES -L${BOOST_LIB_PATH} -lboost_filesystem -lboost_system)
-#	endif(MSVC)
-endif(BUILD_WITH_LIBLAS)
-
-if (BUILD_WITH_FANN)
-	find_package(FANN)
-	if(FANN_FOUND)
-		include_directories(${FANN_INCLUDE_DIRS})
-		add_definitions(-DFANN_DLL)
-	endif()
-endif(BUILD_WITH_FANN)
-
-# if (BUILD_WITH_NLOPT)
-#   find_package(NLOPT)
-#   if(NLOPT_FOUND)
-#     include_directories(${NLOPT_INCLUDE_DIRS})
-#     add_definitions(-DNLOPT_DLL)
-#   endif()
-# endif(BUILD_WITH_NLOPT)
-###############################################################################
-
-###############################################################################
-# Build libraries
-include_directories("${PROJECT_SOURCE_DIR}")
-add_subdirectory ("${PROJECT_SOURCE_DIR}")
-###############################################################################
-
-###############################################################################
-# Build executables
-
-#configure_file ( "cmake-config.in" "${PROJECT_BINARY_DIR}/pktools-config" @ONLY )
-#test
-configure_file ( "cmake-config.in" "${CMAKE_CURRENT_BINARY_DIR}/pktools-config" @ONLY )
-configure_file ( "cmake.pc.in" "pktools.pc"  @ONLY)
-
-
-set_property(GLOBAL PROPERTY USE_FOLDERS ON)
-
-set(PKLIBS ${PKTOOLS_BASE_LIB_NAME} ${PKTOOLS_IMAGECLASSES_LIB_NAME} ${PKTOOLS_FILECLASSES_LIB_NAME} ${PKTOOLS_ALGORITHMS_LIB_NAME} ${GDAL_LIBRARIES} ${GSL_LIBRARIES} ${Boost_LIBRARIES})
-
-set(PKUTILITIES
-  pkinfo
-  pkcrop
-  pkdiff
-  pkgetmask
-  pksetmask
-  pkcreatect
-  pkdumpimg
-  pkdumpogr
-  pksieve
-  pkstat
-  pkstatascii
-  pkstatogr
-  pkstatprofile
-  pkegcs
-  pkextractimg
-  pkextractogr
-  pkfillnodata
-  pkfilter
-  pkfilterdem
-  pkfilterascii
-  pkdsm2shadow
-  pkcomposite
-  pkpolygonize
-  pkascii2img
-  pksvm
-  pksvmogr
-  pkfssvm
-  pkoptsvm
-  pkascii2ogr
-  pkreclass
-  pkreclassogr
-  pkkalman
-  )
-
-set(PKLASUTILITIES
-	pklas2img
-)
-
-set(PKFANNUTILITIES
-	pkann
-	pkannogr
-	pkfsann
-	pkregann
-)
-
-# set(PKNLOPTUTILITIES
-# 	pkoptsvm
-# )
-
-if (PKTOOLS_WITH_UTILITIES)
-	foreach(UTILITY ${PKUTILITIES})
-    add_executable(${UTILITY} src/apps/${UTILITY}.cc)
-    target_link_libraries(${UTILITY} ${PKLIBS})
-    set_target_properties(${UTILITY} PROPERTIES FOLDER utilities)
-	endforeach()
-
-	if (BUILD_WITH_LIBLAS)
-		set(PKLIBS ${PKLIBS} ${PKTOOLS_LASCLASSES_LIB_NAME})
-		foreach(PKLASUTILITY ${PKLASUTILITIES})
-		  add_executable(${PKLASUTILITY} src/apps/${PKLASUTILITY}.cc)
-		  target_link_libraries (${PKLASUTILITY} 
-		    ${PKLIBS} ${LIBLAS_LIBRARIES})
-    	set_target_properties(${PKLASUTILITY} PROPERTIES FOLDER utilities)
-		endforeach()
-	endif()
-	if (BUILD_WITH_FANN)
-		set(PKLIBS ${PKLIBS} ${FANN_LIBRARIES})
-		foreach(PKFANNUTILITY ${PKFANNUTILITIES})
-		  add_executable(${PKFANNUTILITY} src/apps/${PKFANNUTILITY}.cc)
-		  # message(${PKLIBS})
-		  target_link_libraries (${PKFANNUTILITY} ${PKLIBS})
-      set_target_properties(${PKFANNUTILITY} PROPERTIES FOLDER utilities)
-	  endforeach()
-	endif()
-	# if (BUILD_WITH_NLOPT)
-	# 	set(PKLIBS ${PKLIBS} ${NLOPT_LIBRARIES})
-	# 	foreach(PKNLOPTUTILITY ${PKNLOPTUTILITIES})
-	# 	add_executable(${PKNLOPTUTILITY} src/apps/${PKNLOPTUTILITY}.cc)
-	# 	message(${PKLIBS})
-	# 	target_link_libraries (${PKNLOPTUTILITY} ${PKLIBS})
-    	# 	set_target_properties(${PKNLOPTUTILITY} PROPERTIES FOLDER utilities)
-	# 	endforeach()
-	# endif()
-	# add_custom_target(utilities DEPENDS ${PKUTILITIES} ${PKLASUTILITIES} ${PKFANNUTILITIES} ${PKNLOPTUTILITIES})
-	add_custom_target(utilities DEPENDS ${PKUTILITIES} ${PKLASUTILITIES} ${PKFANNUTILITIES})
-	set_target_properties(utilities PROPERTIES FOLDER
-	phony)
-
-endif()
-
-
-###############################################################################
-
-###############################################################################
-# Installation
-#install (FILES "${PROJECT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-#install (FILES "${PROJECT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-#test
-install (FILES "${CMAKE_CURRENT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-install (FILES "pktools.pc" DESTINATION lib/pkgconfig PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
-
-if (PKTOOLS_WITH_UTILITIES)
-	install (TARGETS ${PKUTILITIES} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-	if (BUILD_WITH_LIBLAS)
-		install (TARGETS ${PKLASUTILITIES} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-	endif(BUILD_WITH_LIBLAS)
-	if (BUILD_WITH_FANN)
-		install (TARGETS ${PKFANNUTILITIES} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-	endif(BUILD_WITH_FANN)
-	# if (BUILD_WITH_NLOPT)
-	# 	install (TARGETS ${PKNLOPTUTILITIES} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-	# endif(BUILD_WITH_NLOPT)
-endif(PKTOOLS_WITH_UTILITIES)
-
-###############################################################################
-
-###############################################################################
-# Create Distribution
-SET(CPACK_SOURCE_GENERATOR "TGZ;ZIP;TBZ2")
-SET(CPACK_CMAKE_GENERATOR "Unix Makefiles")
-
-set(CPACK_SOURCE_PACKAGE_FILE_NAME
-  "${CMAKE_PROJECT_NAME}-${PKTOOLS_VERSION_MAJOR}.${PKTOOLS_VERSION_MINOR}.${PKTOOLS_VERSION_PATCH}")
-
-# Set files to ignore
-list(APPEND CPACK_SOURCE_IGNORE_FILES "_CPack_Packages")
-list(APPEND CPACK_SOURCE_IGNORE_FILES ".gz")
-list(APPEND CPACK_SOURCE_IGNORE_FILES ".bz2")
-list(APPEND CPACK_SOURCE_IGNORE_FILES ".zip")
-list(APPEND CPACK_SOURCE_IGNORE_FILES ".svn")
-list(APPEND CPACK_SOURCE_IGNORE_FILES ".git")
-list(APPEND CPACK_SOURCE_IGNORE_FILES "README")
-list(APPEND CPACK_SOURCE_IGNORE_FILES "HOWTORELEASE.txt")
-list(APPEND CPACK_SOURCE_IGNORE_FILES "CMakeCache.txt")
-list(APPEND CPACK_SOURCE_IGNORE_FILES "CPackConfig.cmake")
-list(APPEND CPACK_SOURCE_IGNORE_FILES "schemas")
-list(APPEND CPACK_SOURCE_IGNORE_FILES "/build/;~$;${CPACK_SOURCE_IGNORE_FILES}")
-
-include(CPack)
-
-add_custom_target(dist COMMAND ${CMAKE_MAKE_PROGRAM} package_source)
-###############################################################################

debian/changelog

+pktools (2.6.7.6+ds-1) unstable; urgency=medium
+
+  * New upstream release.
+  * Exclude more automatically removed files from upstream tarball.
+  * Drop patches, applied upstream.
+
+ -- Bas Couwenberg <sebastic@debian.org>  Sun, 25 Nov 2018 18:56:49 +0100
+
 pktools (2.6.7.5+ds-1) unstable; urgency=medium
 
   * New upstream release.

debian/copyright

@@ -3,8 +3,9 @@ Upstream-Name: pktools
 Upstream-Contact: Pieter Kempeneers <kempenep@gmail.com>
 Source: http://download.savannah.gnu.org/releases/pktools/
 Files-Excluded: build/*
- src/CMakeLists.txt.orig
- src/CMakeLists.txt.rej
+ **/CMakeLists.txt.orig
+ **/CMakeLists.txt.rej
+ *.patch
 
 Files: *
 Copyright: 2008-2017, Pieter Kempeneers <kempenep@gmail.com>

debian/patches/multiarch.patch

-Description: Add option to set install path for libraries.
-Author: Bas Couwenberg <sebastic@debian.org>
-Forwarded: https://savannah.nongnu.org/bugs/index.php?53082
-
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -87,6 +87,8 @@ set(BUILD_WITH_FANN FALSE CACHE BOOL "Ch
- #set(BUILD_WITH_NLOPT FALSE CACHE BOOL "Choose if pktools is to be built with nlopt")
- set(PKTOOLS_WITH_UTILITIES TRUE CACHE BOOL "Choose if pktools utilities should be built")
- 
-+option(INSTALL_LIBRARY_DIR "Install path for libraries" ${PROJECT_LIBRARY_DIR})
-+
- set(GSL_INCLUDE_DIR /usr/include CACHE PATH "Include PATH for GSL")
- set(GSL_LIB_PATH /usr/lib CACHE PATH "Library PATH for GSL")
- 
-@@ -364,7 +366,7 @@ endif()
- #install (FILES "${PROJECT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
- #test
- install (FILES "${CMAKE_CURRENT_BINARY_DIR}/pktools-config" DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
--install (FILES "pktools.pc" DESTINATION lib/pkgconfig PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
-+install (FILES "pktools.pc" DESTINATION ${INSTALL_LIBRARY_DIR}/pkgconfig PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ)
- 
- if (PKTOOLS_WITH_UTILITIES)
- 	install (TARGETS ${PKUTILITIES} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
---- a/src/CMakeLists.txt
-+++ b/src/CMakeLists.txt
-@@ -148,7 +148,7 @@ endif(BUILD_WITH_LIBLAS)
- 
- ###############################################################################
- # Installation
--install (TARGETS ${PKTOOLS_BASE_LIB_NAME} ${PKTOOLS_IMAGECLASSES_LIB_NAME} ${PKTOOLS_ALGORITHMS_LIB_NAME} ${PKTOOLS_FILECLASSES_LIB_NAME} DESTINATION lib)
-+install (TARGETS ${PKTOOLS_BASE_LIB_NAME} ${PKTOOLS_IMAGECLASSES_LIB_NAME} ${PKTOOLS_ALGORITHMS_LIB_NAME} ${PKTOOLS_FILECLASSES_LIB_NAME} DESTINATION ${INSTALL_LIBRARY_DIR})
- 
- install (FILES ${BASE_H} DESTINATION ${PROJECT_INCLUDE_DIR}/base)
- install (FILES ${IMGCLASS_H} DESTINATION ${PROJECT_INCLUDE_DIR}/imageclasses)
-@@ -156,7 +156,7 @@ install (FILES ${ALGOR_H} DESTINATION ${
- install (FILES ${FILECLASS_H} DESTINATION ${PROJECT_INCLUDE_DIR}/fileclasses)
- 
- if (BUILD_WITH_LIBLAS)
--install (TARGETS ${PKTOOLS_LASCLASSES_LIB_NAME} DESTINATION lib)
-+install (TARGETS ${PKTOOLS_LASCLASSES_LIB_NAME} DESTINATION ${INSTALL_LIBRARY_DIR})
- install (FILES ${LASCLASS_H} DESTINATION ${PROJECT_INCLUDE_DIR}/lasclasses)
- endif(BUILD_WITH_LIBLAS)
- ###############################################################################

debian/patches/series

-spelling-errors2.patch
-multiarch.patch

debian/patches/spelling-errors2.patch

-Description: Fix spelling errors.
- * colums -> columns
- * ommit  -> omit
-Author: Bas Couwenberg <sebastic@debian.org>
-Forwarded: https://savannah.nongnu.org/bugs/index.php?49352
-
---- a/src/apps/pkreclass.cc
-+++ b/src/apps/pkreclass.cc
-@@ -43,7 +43,7 @@ along with pktools.  If not, see <http:/
-  | m      | mask                 | std::string |       |Mask image(s) | 
-  | msknodata | msknodata            | unsigned short | 1     |Mask value(s) where image has nodata. Use one value for each mask, or multiple values for a single mask. | 
-  | nodata | nodata               | int  | 0     |nodata value to put in image if not valid (0) | 
-- | code   | code                 | std::string |       |Recode text file (2 colums: from to) | 
-+ | code   | code                 | std::string |       |Recode text file (2 columns: from to) | 
-  | c      | class                | std::string |       |list of classes to reclass (in combination with reclass option) | 
-  | r      | reclass              | std::string |       |list of recoded classes (in combination with class option) | 
-  | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid) | 
-@@ -77,7 +77,7 @@ int main(int argc, char *argv[])
-   Optionpk<unsigned short>  band_opt("b", "band", "band index(es) to replace (other bands are copied to output)", 0);
-   Optionpk<string> type_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image", "");
-   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate).","GTiff");
--  Optionpk<string> code_opt("code", "code", "Recode text file (2 colums: from to)");
-+  Optionpk<string> code_opt("code", "code", "Recode text file (2 columns: from to)");
-   Optionpk<string> class_opt("c", "class", "list of classes to reclass (in combination with reclass option)");
-   Optionpk<string> reclass_opt("r", "reclass", "list of recoded classes (in combination with class option)");
-   Optionpk<string> fieldname_opt("n", "fname", "field name of the shape file to be replaced", "label");
---- a/src/apps/pkfilter.cc
-+++ b/src/apps/pkfilter.cc
-@@ -211,7 +211,7 @@ pkfilter -i lena.tif -o sobelx.tif -f so
-  | interp | interp               | std::string | akima |type of interpolation for spectral filtering (see http://www.gnu.org/software/gsl/manual/html_node/Interpolation-Types.html) | 
-  | ot     | otype                | std::string |       |Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image | 
-  | of     | oformat              | std::string | GTiff |Output image format (see also gdal_translate).| 
-- | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table | 
-+ | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table | 
-  | circ   | circular             | bool | false |circular disc kernel for dilation and erosion | 
- 
- Usage: pkfilter -i input -o output [-f filter | -perc value | -srf file [-srf file]* -win wavelength [-win wavelength]* | -wout wavelength -fwhm value [-wout wavelength -fwhm value]* -win wavelength [-win wavelength]*]
-@@ -256,7 +256,7 @@ int main(int argc,char **argv) {
-   Optionpk<std::string> interpolationType_opt("interp", "interp", "type of interpolation for spectral filtering (see http://www.gnu.org/software/gsl/manual/html_node/Interpolation-Types.html)","akima");
-   Optionpk<std::string>  otype_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image","");
-   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate).","GTiff");
--  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table");
-+  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table");
-   Optionpk<string> option_opt("co", "co", "Creation option for output file. Multiple options can be specified.");
-   Optionpk<short> down_opt("d", "down", "down sampling factor. Use value 1 for no downsampling). Use value n>1 for downsampling (aggregation)", 1);
-   Optionpk<string> beta_opt("beta", "beta", "ASCII file with beta for each class transition in Markov Random Field");
---- a/src/apps/pkfilterdem.cc
-+++ b/src/apps/pkfilterdem.cc
-@@ -61,7 +61,7 @@ The utility pkfilterdem can be used to f
-  | minchange | minchange            | short | 0     |Stop iterations when no more pixels are changed than this threshold. | 
-  | ot     | otype                | std::string |       |Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image | 
-  | of     | oformat              | std::string | GTiff |Output image format (see also gdal_translate).| 
-- | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table | 
-+ | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table | 
-  | nodata | nodata               | short |       |nodata value | 
- 
- Usage: pkfilterdem -i input.txt -o output
-@@ -85,7 +85,7 @@ int main(int argc,char **argv) {
-   Optionpk<short> minChange_opt("minchange", "minchange", "Stop iterations when no more pixels are changed than this threshold.", 0);
-   Optionpk<std::string>  otype_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image","");
-   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate).","GTiff");
--  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table");
-+  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table");
-   Optionpk<string> option_opt("co", "co", "Creation option for output file. Multiple options can be specified.");
-   Optionpk<short> nodata_opt("nodata", "nodata", "nodata value");
-   Optionpk<short> verbose_opt("v", "verbose", "verbose mode if > 0", 0,2);
---- a/src/apps/pkstatprofile.cc
-+++ b/src/apps/pkstatprofile.cc
-@@ -104,7 +104,7 @@ int main(int argc,char **argv) {
-   Optionpk<double> nodata_opt("nodata", "nodata", "nodata value(s)");
-   Optionpk<std::string>  otype_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image","");
-   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate)","GTiff");
--  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table");
-+  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table");
-   Optionpk<string> option_opt("co", "co", "Creation option for output file. Multiple options can be specified.");
-   // Optionpk<short> down_opt("d", "down", "down sampling factor. Use value 1 for no downsampling). Use value n>1 for downsampling (aggregation)", 1);
-   Optionpk<short> verbose_opt("v", "verbose", "verbose mode if > 0", 0,2);

gdal-c++11.patch

-Description: Use C++11 for compatibility with GDAL 2.3.0.
-Author: Bas Couwenberg <sebastic@debian.org>
-
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -166,7 +166,7 @@ else()
- 
-     set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fPIC ${PKTOOLS_COMMON_CXX_FLAGS}")
-     if (CMAKE_COMPILER_IS_GNUCXX)
--      set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++98")
-+      set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11")
-     endif()
- 
-   elseif("${CMAKE_CXX_COMPILER_ID}" MATCHES "Clang" OR "${CMAKE_CXX_COMPILER}" MATCHES "clang")

src/CMakeLists.txt

@@ -148,7 +148,7 @@ endif(BUILD_WITH_LIBLAS)
 
 ###############################################################################
 # Installation
-install (TARGETS ${PKTOOLS_BASE_LIB_NAME} ${PKTOOLS_IMAGECLASSES_LIB_NAME} ${PKTOOLS_ALGORITHMS_LIB_NAME} ${PKTOOLS_FILECLASSES_LIB_NAME} DESTINATION lib)
+install (TARGETS ${PKTOOLS_BASE_LIB_NAME} ${PKTOOLS_IMAGECLASSES_LIB_NAME} ${PKTOOLS_ALGORITHMS_LIB_NAME} ${PKTOOLS_FILECLASSES_LIB_NAME} DESTINATION ${INSTALL_LIBRARY_DIR})
 
 install (FILES ${BASE_H} DESTINATION ${PROJECT_INCLUDE_DIR}/base)
 install (FILES ${IMGCLASS_H} DESTINATION ${PROJECT_INCLUDE_DIR}/imageclasses)
@@ -156,7 +156,8 @@ install (FILES ${ALGOR_H} DESTINATION ${PROJECT_INCLUDE_DIR}/algorithms)
 install (FILES ${FILECLASS_H} DESTINATION ${PROJECT_INCLUDE_DIR}/fileclasses)
 
 if (BUILD_WITH_LIBLAS)
-install (TARGETS ${PKTOOLS_LASCLASSES_LIB_NAME} DESTINATION lib)
+install (TARGETS ${PKTOOLS_LASCLASSES_LIB_NAME} DESTINATION ${INSTALL_LIBRARY_DIR})
+
 install (FILES ${LASCLASS_H} DESTINATION ${PROJECT_INCLUDE_DIR}/lasclasses)
 endif(BUILD_WITH_LIBLAS)
 ###############################################################################

src/apps/pkfilter.cc

@@ -211,7 +211,7 @@ pkfilter -i lena.tif -o sobelx.tif -f sobelx -dx 5 -dy 5
  | interp | interp               | std::string | akima |type of interpolation for spectral filtering (see http://www.gnu.org/software/gsl/manual/html_node/Interpolation-Types.html) | 
  | ot     | otype                | std::string |       |Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image | 
  | of     | oformat              | std::string | GTiff |Output image format (see also gdal_translate).| 
- | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table | 
+ | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table | 
  | circ   | circular             | bool | false |circular disc kernel for dilation and erosion | 
 
 Usage: pkfilter -i input -o output [-f filter | -perc value | -srf file [-srf file]* -win wavelength [-win wavelength]* | -wout wavelength -fwhm value [-wout wavelength -fwhm value]* -win wavelength [-win wavelength]*]
@@ -256,7 +256,7 @@ int main(int argc,char **argv) {
   Optionpk<std::string> interpolationType_opt("interp", "interp", "type of interpolation for spectral filtering (see http://www.gnu.org/software/gsl/manual/html_node/Interpolation-Types.html)","akima");
   Optionpk<std::string>  otype_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image","");
   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate).","GTiff");
-  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table");
+  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table");
   Optionpk<string> option_opt("co", "co", "Creation option for output file. Multiple options can be specified.");
   Optionpk<short> down_opt("d", "down", "down sampling factor. Use value 1 for no downsampling). Use value n>1 for downsampling (aggregation)", 1);
   Optionpk<string> beta_opt("beta", "beta", "ASCII file with beta for each class transition in Markov Random Field");

src/apps/pkfilterdem.cc

@@ -61,7 +61,7 @@ The utility pkfilterdem can be used to filter digital elevation models. It is ty
  | minchange | minchange            | short | 0     |Stop iterations when no more pixels are changed than this threshold. | 
  | ot     | otype                | std::string |       |Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image | 
  | of     | oformat              | std::string | GTiff |Output image format (see also gdal_translate).| 
- | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table | 
+ | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table | 
  | nodata | nodata               | short |       |nodata value | 
 
 Usage: pkfilterdem -i input.txt -o output
@@ -85,7 +85,7 @@ int main(int argc,char **argv) {
   Optionpk<short> minChange_opt("minchange", "minchange", "Stop iterations when no more pixels are changed than this threshold.", 0);
   Optionpk<std::string>  otype_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image","");
   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate).","GTiff");
-  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table");
+  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table");
   Optionpk<string> option_opt("co", "co", "Creation option for output file. Multiple options can be specified.");
   Optionpk<short> nodata_opt("nodata", "nodata", "nodata value");
   Optionpk<short> verbose_opt("v", "verbose", "verbose mode if > 0", 0,2);

src/apps/pkreclass.cc

@@ -43,7 +43,7 @@ along with pktools.  If not, see <http://www.gnu.org/licenses/>.
  | m      | mask                 | std::string |       |Mask image(s) | 
  | msknodata | msknodata            | unsigned short | 1     |Mask value(s) where image has nodata. Use one value for each mask, or multiple values for a single mask. | 
  | nodata | nodata               | int  | 0     |nodata value to put in image if not valid (0) | 
- | code   | code                 | std::string |       |Recode text file (2 colums: from to) | 
+ | code   | code                 | std::string |       |Recode text file (2 columns: from to) | 
  | c      | class                | std::string |       |list of classes to reclass (in combination with reclass option) | 
  | r      | reclass              | std::string |       |list of recoded classes (in combination with class option) | 
  | ct     | ct                   | std::string |       |color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid) | 
@@ -77,7 +77,7 @@ int main(int argc, char *argv[])
   Optionpk<unsigned short>  band_opt("b", "band", "band index(es) to replace (other bands are copied to output)", 0);
   Optionpk<string> type_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image", "");
   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate).","GTiff");
-  Optionpk<string> code_opt("code", "code", "Recode text file (2 colums: from to)");
+  Optionpk<string> code_opt("code", "code", "Recode text file (2 columns: from to)");
   Optionpk<string> class_opt("c", "class", "list of classes to reclass (in combination with reclass option)");
   Optionpk<string> reclass_opt("r", "reclass", "list of recoded classes (in combination with class option)");
   Optionpk<string> fieldname_opt("n", "fname", "field name of the shape file to be replaced", "label");

src/apps/pkstatprofile.cc

@@ -104,7 +104,7 @@ int main(int argc,char **argv) {
   Optionpk<double> nodata_opt("nodata", "nodata", "nodata value(s)");
   Optionpk<std::string>  otype_opt("ot", "otype", "Data type for output image ({Byte/Int16/UInt16/UInt32/Int32/Float32/Float64/CInt16/CInt32/CFloat32/CFloat64}). Empty string: inherit type from input image","");
   Optionpk<string>  oformat_opt("of", "oformat", "Output image format (see also gdal_translate)","GTiff");
-  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to ommit color table");
+  Optionpk<string>  colorTable_opt("ct", "ct", "color table (file with 5 columns: id R G B ALFA (0: transparent, 255: solid). Use none to omit color table");
   Optionpk<string> option_opt("co", "co", "Creation option for output file. Multiple options can be specified.");
   // Optionpk<short> down_opt("d", "down", "down sampling factor. Use value 1 for no downsampling). Use value n>1 for downsampling (aggregation)", 1);
   Optionpk<short> verbose_opt("v", "verbose", "verbose mode if > 0", 0,2);