Upgrading to GitLab 11.10.0. Expect errors and see debian-infrastructure-announce@lists.debian.org for further information.

Commit a3ab2688 authored by Pietro Battiston's avatar Pietro Battiston

Merge tag 'upstream/5.7.0'

Upstream version 5.7.0
parents 958e8c2e 55f8f758
2017-09-01 Giulio Bottazzi <bottazzi@sssup.it>
* configure.ac: version updated to 5.7.0
* gbtest.c : added 'WILCO2', Wilcoxon signed rank test on paired
samples.
* tools.c (gbutils_header): updated date in copyright message.
* gbfun.c (main): added option -T to change the computation from
row-wise to column wise.
* gbtest.c (main): further code cleaning; local copy of data is
generated for one, two or paired sample tests; this is safest when
multiple tests are performed.
2017-08-28 Giulio Bottazzi <bottazzi@sssup.it>
* gbtest.c, gbstat.c: added option -o to set output format
2017-08-24 Giulio Bottazzi <bottazzi@sssup.it>
* gbtest.c: some code cleaning.
* gbtest.c (FP_test): changed the sign of the U statistics for
consistency with other tests
2017-08-23 Giulio Bottazzi <bottazzi@sssup.it>
* gbtest.c (R_pscore): corrected the implementation of the
Fisher's transformation.
* gbtest.c (WILCO_test, WMW_test): check for memory leaks and
removed a bug.
* gbtest.c (Tpaired_test): added Spearman's T test for paired
samples.
2016-06-04 Giulio Bottazzi <bottazzi@sssup.it>
* configure.ac: version updated to 5.6.9
* lib/Makefile.am, lib/dummy.c: added a dummy function to be
included in the library 'libgnu.a' also when no other functions
are included. This is done because Darwin (OS X) does not handle
empty libraries file.
2016-05-31 Giulio Bottazzi <bottazzi@sssup.it>
* configure.ac: added AM_PROG_AR to check the syntax of ar. This
seems required to compile static library on Mac
2015-11-22 Giulio Bottazzi <bottazzi@sssup.it>
* ALL: Updated version number to 5.6.8 Tagged with CVS using
......@@ -17,7 +69,7 @@
* README, doc/intro.pdf, doc/intro.txt: updated to reflect
availability on official Debian system; removed obsolete list of
files form the README.
files from the README.
* configure.ac: Source package version updated to 5.6.7.
......
# Makefile.in generated by automake 1.14.1 from Makefile.am.
# Makefile.in generated by automake 1.15 from Makefile.am.
# @configure_input@
# Copyright (C) 1994-2013 Free Software Foundation, Inc.
# Copyright (C) 1994-2014 Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
......@@ -16,7 +16,17 @@
VPATH = @srcdir@
am__is_gnu_make = test -n '$(MAKEFILE_LIST)' && test -n '$(MAKELEVEL)'
am__is_gnu_make = { \
if test -z '$(MAKELEVEL)'; then \
false; \
elif test -n '$(MAKE_HOST)'; then \
true; \
elif test -n '$(MAKE_VERSION)' && test -n '$(CURDIR)'; then \
true; \
else \
false; \
fi; \
}
am__make_running_with_option = \
case $${target_option-} in \
?) ;; \
......@@ -95,12 +105,6 @@ EXTRA_PROGRAMS = gbget$(EXEEXT) gbker$(EXEEXT) gbkreg$(EXEEXT) \
gbrand$(EXEEXT) gbhill$(EXEEXT) gbnlmult$(EXEEXT) \
gbnlprobit$(EXEEXT) gbnlpolyit$(EXEEXT) gbacorr$(EXEEXT)
subdir = .
DIST_COMMON = INSTALL NEWS README AUTHORS ChangeLog \
$(srcdir)/Makefile.in $(srcdir)/Makefile.am \
$(top_srcdir)/configure $(am__configure_deps) \
$(srcdir)/config.h.in $(dist_bin_SCRIPTS) depcomp \
$(dist_man1_MANS) COPYING TODO compile config.guess config.sub \
install-sh missing
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/m4/getdelim.m4 \
$(top_srcdir)/m4/getline.m4 $(top_srcdir)/m4/getsubopt.m4 \
......@@ -109,6 +113,8 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/getdelim.m4 \
$(top_srcdir)/m4/strchrnul.m4 $(top_srcdir)/configure.ac
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
$(ACLOCAL_M4)
DIST_COMMON = $(srcdir)/Makefile.am $(top_srcdir)/configure \
$(am__configure_deps) $(dist_bin_SCRIPTS) $(am__DIST_COMMON)
am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \
configure.lineno config.status.lineno
mkinstalldirs = $(install_sh) -d
......@@ -380,6 +386,10 @@ ETAGS = etags
CTAGS = ctags
CSCOPE = cscope
DIST_SUBDIRS = $(SUBDIRS)
am__DIST_COMMON = $(dist_man1_MANS) $(srcdir)/Makefile.in \
$(srcdir)/config.h.in AUTHORS COPYING ChangeLog INSTALL NEWS \
README TODO compile config.guess config.sub depcomp install-sh \
missing
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
distdir = $(PACKAGE)-$(VERSION)
top_distdir = $(distdir)
......@@ -551,6 +561,7 @@ pdfdir = @pdfdir@
prefix = @prefix@
program_transform_name = @program_transform_name@
psdir = @psdir@
runstatedir = @runstatedir@
sbindir = @sbindir@
sharedstatedir = @sharedstatedir@
srcdir = @srcdir@
......@@ -643,7 +654,6 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps)
echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu Makefile'; \
$(am__cd) $(top_srcdir) && \
$(AUTOMAKE) --gnu Makefile
.PRECIOUS: Makefile
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
@case '$?' in \
*config.status*) \
......@@ -1185,15 +1195,15 @@ dist-xz: distdir
$(am__post_remove_distdir)
dist-tarZ: distdir
@echo WARNING: "Support for shar distribution archives is" \
"deprecated." >&2
@echo WARNING: "Support for distribution archives compressed with" \
"legacy program 'compress' is deprecated." >&2
@echo WARNING: "It will be removed altogether in Automake 2.0" >&2
tardir=$(distdir) && $(am__tar) | compress -c >$(distdir).tar.Z
$(am__post_remove_distdir)
dist-shar: distdir
@echo WARNING: "Support for distribution archives compressed with" \
"legacy program 'compress' is deprecated." >&2
@echo WARNING: "Support for shar distribution archives is" \
"deprecated." >&2
@echo WARNING: "It will be removed altogether in Automake 2.0" >&2
shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz
$(am__post_remove_distdir)
......@@ -1229,17 +1239,17 @@ distcheck: dist
esac
chmod -R a-w $(distdir)
chmod u+w $(distdir)
mkdir $(distdir)/_build $(distdir)/_inst
mkdir $(distdir)/_build $(distdir)/_build/sub $(distdir)/_inst
chmod a-w $(distdir)
test -d $(distdir)/_build || exit 0; \
dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
&& dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \
&& am__cwd=`pwd` \
&& $(am__cd) $(distdir)/_build \
&& ../configure \
&& $(am__cd) $(distdir)/_build/sub \
&& ../../configure \
$(AM_DISTCHECK_CONFIGURE_FLAGS) \
$(DISTCHECK_CONFIGURE_FLAGS) \
--srcdir=.. --prefix="$$dc_install_base" \
--srcdir=../.. --prefix="$$dc_install_base" \
&& $(MAKE) $(AM_MAKEFLAGS) \
&& $(MAKE) $(AM_MAKEFLAGS) dvi \
&& $(MAKE) $(AM_MAKEFLAGS) check \
......@@ -1427,6 +1437,8 @@ uninstall-man: uninstall-man1
uninstall-binPROGRAMS uninstall-dist_binSCRIPTS uninstall-man \
uninstall-man1
.PRECIOUS: Makefile
#Possibly build man pages
#rules to build man pages
......
This diff is collapsed.
......@@ -3,7 +3,7 @@
scriptversion=2012-10-14.11; # UTC
# Copyright (C) 1999-2013 Free Software Foundation, Inc.
# Copyright (C) 1999-2014 Free Software Foundation, Inc.
# Written by Tom Tromey <tromey@cygnus.com>.
#
# This program is free software; you can redistribute it and/or modify
......
This diff is collapsed.
#! /bin/sh
# Configuration validation subroutine script.
# Copyright 1992-2013 Free Software Foundation, Inc.
# Copyright 1992-2015 Free Software Foundation, Inc.
timestamp='2013-08-10'
timestamp='2015-08-20'
# This file is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
......@@ -25,7 +25,7 @@ timestamp='2013-08-10'
# of the GNU General Public License, version 3 ("GPLv3").
# Please send patches with a ChangeLog entry to config-patches@gnu.org.
# Please send patches to <config-patches@gnu.org>.
#
# Configuration subroutine to validate and canonicalize a configuration type.
# Supply the specified configuration type as an argument.
......@@ -68,7 +68,7 @@ Report bugs and patches to <config-patches@gnu.org>."
version="\
GNU config.sub ($timestamp)
Copyright 1992-2013 Free Software Foundation, Inc.
Copyright 1992-2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE."
......@@ -117,7 +117,7 @@ maybe_os=`echo $1 | sed 's/^\(.*\)-\([^-]*-[^-]*\)$/\2/'`
case $maybe_os in
nto-qnx* | linux-gnu* | linux-android* | linux-dietlibc | linux-newlib* | \
linux-musl* | linux-uclibc* | uclinux-uclibc* | uclinux-gnu* | kfreebsd*-gnu* | \
knetbsd*-gnu* | netbsd*-gnu* | \
knetbsd*-gnu* | netbsd*-gnu* | netbsd*-eabi* | \
kopensolaris*-gnu* | \
storm-chaos* | os2-emx* | rtmk-nova*)
os=-$maybe_os
......@@ -255,16 +255,18 @@ case $basic_machine in
| arc | arceb \
| arm | arm[bl]e | arme[lb] | armv[2-8] | armv[3-8][lb] | armv7[arm] \
| avr | avr32 \
| ba \
| be32 | be64 \
| bfin \
| c4x | c8051 | clipper \
| d10v | d30v | dlx | dsp16xx \
| epiphany \
| fido | fr30 | frv \
| e2k | epiphany \
| fido | fr30 | frv | ft32 \
| h8300 | h8500 | hppa | hppa1.[01] | hppa2.0 | hppa2.0[nw] | hppa64 \
| hexagon \
| i370 | i860 | i960 | ia64 \
| ip2k | iq2000 \
| k1om \
| le32 | le64 \
| lm32 \
| m32c | m32r | m32rle | m68000 | m68k | m88k \
......@@ -282,8 +284,10 @@ case $basic_machine in
| mips64vr5900 | mips64vr5900el \
| mipsisa32 | mipsisa32el \
| mipsisa32r2 | mipsisa32r2el \
| mipsisa32r6 | mipsisa32r6el \
| mipsisa64 | mipsisa64el \
| mipsisa64r2 | mipsisa64r2el \
| mipsisa64r6 | mipsisa64r6el \
| mipsisa64sb1 | mipsisa64sb1el \
| mipsisa64sr71k | mipsisa64sr71kel \
| mipsr5900 | mipsr5900el \
......@@ -295,14 +299,14 @@ case $basic_machine in
| nds32 | nds32le | nds32be \
| nios | nios2 | nios2eb | nios2el \
| ns16k | ns32k \
| open8 \
| or1k | or32 \
| open8 | or1k | or1knd | or32 \
| pdp10 | pdp11 | pj | pjl \
| powerpc | powerpc64 | powerpc64le | powerpcle \
| pyramid \
| riscv32 | riscv64 \
| rl78 | rx \
| score \
| sh | sh[1234] | sh[24]a | sh[24]aeb | sh[23]e | sh[34]eb | sheb | shbe | shle | sh[1234]le | sh3ele \
| sh | sh[1234] | sh[24]a | sh[24]aeb | sh[23]e | sh[234]eb | sheb | shbe | shle | sh[1234]le | sh3ele \
| sh64 | sh64le \
| sparc | sparc64 | sparc64b | sparc64v | sparc86x | sparclet | sparclite \
| sparcv8 | sparcv9 | sparcv9b | sparcv9v \
......@@ -310,6 +314,7 @@ case $basic_machine in
| tahoe | tic4x | tic54x | tic55x | tic6x | tic80 | tron \
| ubicom32 \
| v850 | v850e | v850e1 | v850e2 | v850es | v850e2v3 \
| visium \
| we32k \
| x86 | xc16x | xstormy16 | xtensa \
| z8k | z80)
......@@ -324,7 +329,10 @@ case $basic_machine in
c6x)
basic_machine=tic6x-unknown
;;
m6811 | m68hc11 | m6812 | m68hc12 | m68hcs12x | picochip)
leon|leon[3-9])
basic_machine=sparc-$basic_machine
;;
m6811 | m68hc11 | m6812 | m68hc12 | m68hcs12x | nvptx | picochip)
basic_machine=$basic_machine-unknown
os=-none
;;
......@@ -369,18 +377,20 @@ case $basic_machine in
| alphapca5[67]-* | alpha64pca5[67]-* | arc-* | arceb-* \
| arm-* | armbe-* | armle-* | armeb-* | armv*-* \
| avr-* | avr32-* \
| ba-* \
| be32-* | be64-* \
| bfin-* | bs2000-* \
| c[123]* | c30-* | [cjt]90-* | c4x-* \
| c8051-* | clipper-* | craynv-* | cydra-* \
| d10v-* | d30v-* | dlx-* \
| elxsi-* \
| e2k-* | elxsi-* \
| f30[01]-* | f700-* | fido-* | fr30-* | frv-* | fx80-* \
| h8300-* | h8500-* \
| hppa-* | hppa1.[01]-* | hppa2.0-* | hppa2.0[nw]-* | hppa64-* \
| hexagon-* \
| i*86-* | i860-* | i960-* | ia64-* \
| ip2k-* | iq2000-* \
| k1om-* \
| le32-* | le64-* \
| lm32-* \
| m32c-* | m32r-* | m32rle-* \
......@@ -400,8 +410,10 @@ case $basic_machine in
| mips64vr5900-* | mips64vr5900el-* \
| mipsisa32-* | mipsisa32el-* \
| mipsisa32r2-* | mipsisa32r2el-* \
| mipsisa32r6-* | mipsisa32r6el-* \
| mipsisa64-* | mipsisa64el-* \
| mipsisa64r2-* | mipsisa64r2el-* \
| mipsisa64r6-* | mipsisa64r6el-* \
| mipsisa64sb1-* | mipsisa64sb1el-* \
| mipsisa64sr71k-* | mipsisa64sr71kel-* \
| mipsr5900-* | mipsr5900el-* \
......@@ -413,16 +425,18 @@ case $basic_machine in
| nios-* | nios2-* | nios2eb-* | nios2el-* \
| none-* | np1-* | ns16k-* | ns32k-* \
| open8-* \
| or1k*-* \
| orion-* \
| pdp10-* | pdp11-* | pj-* | pjl-* | pn-* | power-* \
| powerpc-* | powerpc64-* | powerpc64le-* | powerpcle-* \
| pyramid-* \
| riscv32-* | riscv64-* \
| rl78-* | romp-* | rs6000-* | rx-* \
| sh-* | sh[1234]-* | sh[24]a-* | sh[24]aeb-* | sh[23]e-* | sh[34]eb-* | sheb-* | shbe-* \
| shle-* | sh[1234]le-* | sh3ele-* | sh64-* | sh64le-* \
| sparc-* | sparc64-* | sparc64b-* | sparc64v-* | sparc86x-* | sparclet-* \
| sparclite-* \
| sparcv8-* | sparcv9-* | sparcv9b-* | sparcv9v-* | sv1-* | sx?-* \
| sparcv8-* | sparcv9-* | sparcv9b-* | sparcv9v-* | sv1-* | sx*-* \
| tahoe-* \
| tic30-* | tic4x-* | tic54x-* | tic55x-* | tic6x-* | tic80-* \
| tile*-* \
......@@ -430,6 +444,7 @@ case $basic_machine in
| ubicom32-* \
| v850-* | v850e-* | v850e1-* | v850es-* | v850e2-* | v850e2v3-* \
| vax-* \
| visium-* \
| we32k-* \
| x86-* | x86_64-* | xc16x-* | xps100-* \
| xstormy16-* | xtensa*-* \
......@@ -506,6 +521,9 @@ case $basic_machine in
basic_machine=i386-pc
os=-aros
;;
asmjs)
basic_machine=asmjs-unknown
;;
aux)
basic_machine=m68k-apple
os=-aux
......@@ -767,6 +785,9 @@ case $basic_machine in
basic_machine=m68k-isi
os=-sysv
;;
leon-*|leon[3-9]-*)
basic_machine=sparc-`echo $basic_machine | sed 's/-.*//'`
;;
m68knommu)
basic_machine=m68k-unknown
os=-linux
......@@ -822,6 +843,10 @@ case $basic_machine in
basic_machine=powerpc-unknown
os=-morphos
;;
moxiebox)
basic_machine=moxie-unknown
os=-moxiebox
;;
msdos)
basic_machine=i386-pc
os=-msdos
......@@ -1354,7 +1379,7 @@ case $os in
| -hpux* | -unos* | -osf* | -luna* | -dgux* | -auroraux* | -solaris* \
| -sym* | -kopensolaris* | -plan9* \
| -amigaos* | -amigados* | -msdos* | -newsos* | -unicos* | -aof* \
| -aos* | -aros* \
| -aos* | -aros* | -cloudabi* | -sortix* \
| -nindy* | -vxsim* | -vxworks* | -ebmon* | -hms* | -mvs* \
| -clix* | -riscos* | -uniplus* | -iris* | -rtu* | -xenix* \
| -hiux* | -386bsd* | -knetbsd* | -mirbsd* | -netbsd* \
......@@ -1367,14 +1392,14 @@ case $os in
| -cygwin* | -msys* | -pe* | -psos* | -moss* | -proelf* | -rtems* \
| -mingw32* | -mingw64* | -linux-gnu* | -linux-android* \
| -linux-newlib* | -linux-musl* | -linux-uclibc* \
| -uxpv* | -beos* | -mpeix* | -udk* \
| -uxpv* | -beos* | -mpeix* | -udk* | -moxiebox* \
| -interix* | -uwin* | -mks* | -rhapsody* | -darwin* | -opened* \
| -openstep* | -oskit* | -conix* | -pw32* | -nonstopux* \
| -storm-chaos* | -tops10* | -tenex* | -tops20* | -its* \
| -os2* | -vos* | -palmos* | -uclinux* | -nucleus* \
| -morphos* | -superux* | -rtmk* | -rtmk-nova* | -windiss* \
| -powermax* | -dnix* | -nx6 | -nx7 | -sei* | -dragonfly* \
| -skyos* | -haiku* | -rdos* | -toppers* | -drops* | -es*)
| -skyos* | -haiku* | -rdos* | -toppers* | -drops* | -es* | -tirtos*)
# Remember, each alternative MUST END IN *, to match a version number.
;;
-qnx*)
......@@ -1592,9 +1617,6 @@ case $basic_machine in
mips*-*)
os=-elf
;;
or1k-*)
os=-elf
;;
or32-*)
os=-coff
;;
......
#! /bin/sh
# Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.69 for gbutils 5.6.8.
# Generated by GNU Autoconf 2.69 for gbutils 5.7.0.
#
#
# Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
......@@ -577,8 +577,8 @@ MAKEFLAGS=
# Identity of this package.
PACKAGE_NAME='gbutils'
PACKAGE_TARNAME='gbutils'
PACKAGE_VERSION='5.6.8'
PACKAGE_STRING='gbutils 5.6.8'
PACKAGE_VERSION='5.7.0'
PACKAGE_STRING='gbutils 5.7.0'
PACKAGE_BUGREPORT=''
PACKAGE_URL=''
......@@ -745,6 +745,7 @@ infodir
docdir
oldincludedir
includedir
runstatedir
localstatedir
sharedstatedir
sysconfdir
......@@ -817,6 +818,7 @@ datadir='${datarootdir}'
sysconfdir='${prefix}/etc'
sharedstatedir='${prefix}/com'
localstatedir='${prefix}/var'
runstatedir='${localstatedir}/run'
includedir='${prefix}/include'
oldincludedir='/usr/include'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
......@@ -1069,6 +1071,15 @@ do
| -silent | --silent | --silen | --sile | --sil)
silent=yes ;;
-runstatedir | --runstatedir | --runstatedi | --runstated \
| --runstate | --runstat | --runsta | --runst | --runs \
| --run | --ru | --r)
ac_prev=runstatedir ;;
-runstatedir=* | --runstatedir=* | --runstatedi=* | --runstated=* \
| --runstate=* | --runstat=* | --runsta=* | --runst=* | --runs=* \
| --run=* | --ru=* | --r=*)
runstatedir=$ac_optarg ;;
-sbindir | --sbindir | --sbindi | --sbind | --sbin | --sbi | --sb)
ac_prev=sbindir ;;
-sbindir=* | --sbindir=* | --sbindi=* | --sbind=* | --sbin=* \
......@@ -1206,7 +1217,7 @@ fi
for ac_var in exec_prefix prefix bindir sbindir libexecdir datarootdir \
datadir sysconfdir sharedstatedir localstatedir includedir \
oldincludedir docdir infodir htmldir dvidir pdfdir psdir \
libdir localedir mandir
libdir localedir mandir runstatedir
do
eval ac_val=\$$ac_var
# Remove trailing slashes.
......@@ -1319,7 +1330,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF
\`configure' configures gbutils 5.6.8 to adapt to many kinds of systems.
\`configure' configures gbutils 5.7.0 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]...
......@@ -1359,6 +1370,7 @@ Fine tuning of the installation directories:
--sysconfdir=DIR read-only single-machine data [PREFIX/etc]
--sharedstatedir=DIR modifiable architecture-independent data [PREFIX/com]
--localstatedir=DIR modifiable single-machine data [PREFIX/var]
--runstatedir=DIR modifiable per-process data [LOCALSTATEDIR/run]
--libdir=DIR object code libraries [EPREFIX/lib]
--includedir=DIR C header files [PREFIX/include]
--oldincludedir=DIR C header files for non-gcc [/usr/include]
......@@ -1389,7 +1401,7 @@ fi
if test -n "$ac_init_help"; then
case $ac_init_help in
short | recursive ) echo "Configuration of gbutils 5.6.8:";;
short | recursive ) echo "Configuration of gbutils 5.7.0:";;
esac
cat <<\_ACEOF
......@@ -1480,7 +1492,7 @@ fi
test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
cat <<\_ACEOF
gbutils configure 5.6.8
gbutils configure 5.7.0
generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc.
......@@ -1945,7 +1957,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by gbutils $as_me 5.6.8, which was
It was created by gbutils $as_me 5.7.0, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@
......@@ -2294,7 +2306,7 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu
am__api_version='1.14'
am__api_version='1.15'
ac_aux_dir=
for ac_dir in "$srcdir" "$srcdir/.." "$srcdir/../.."; do
......@@ -2495,8 +2507,8 @@ test "$program_suffix" != NONE &&
ac_script='s/[\\$]/&&/g;s/;s,x,x,$//'
program_transform_name=`$as_echo "$program_transform_name" | sed "$ac_script"`
# expand $ac_aux_dir to an absolute path
am_aux_dir=`cd $ac_aux_dir && pwd`
# Expand $ac_aux_dir to an absolute path.
am_aux_dir=`cd "$ac_aux_dir" && pwd`
if test x"${MISSING+set}" != xset; then
case $am_aux_dir in
......@@ -2515,7 +2527,7 @@ else
$as_echo "$as_me: WARNING: 'missing' script is too old or missing" >&2;}
fi
if test x"${install_sh}" != xset; then
if test x"${install_sh+set}" != xset; then
case $am_aux_dir in
*\ * | *\ *)
install_sh="\${SHELL} '$am_aux_dir/install-sh'" ;;
......@@ -2809,7 +2821,7 @@ fi
# Define the identity of the package.
PACKAGE='gbutils'
VERSION='5.6.8'
VERSION='5.7.0'
cat >>confdefs.h <<_ACEOF
......@@ -2843,8 +2855,8 @@ MAKEINFO=${MAKEINFO-"${am_missing_run}makeinfo"}
# <http://lists.gnu.org/archive/html/automake/2012-07/msg00014.html>
mkdir_p='$(MKDIR_P)'
# We need awk for the "check" target. The system "awk" is bad on
# some platforms.
# We need awk for the "check" target (and possibly the TAP driver). The
# system "awk" is bad on some platforms.
# Always define AMTAR for backward compatibility. Yes, it's still used
# in the wild :-( We should find a proper way to deprecate it ...
AMTAR='$${TAR-tar}'
......@@ -2902,6 +2914,7 @@ END
fi
fi
ac_config_headers="$ac_config_headers config.h"
......@@ -6262,7 +6275,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
ac_log="
This file was extended by gbutils $as_me 5.6.8, which was
This file was extended by gbutils $as_me 5.7.0, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES
......@@ -6328,7 +6341,7 @@ _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\
gbutils config.status 5.6.8
gbutils config.status 5.7.0
configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\"
......
# Process this file with autoconf to produce a configure script.
AC_INIT([gbutils],[5.6.8])
AC_INIT([gbutils],[5.7.0])
AC_CONFIG_SRCDIR([tools.c])
AM_INIT_AUTOMAKE
......
File mode changed from 100644 to 100755
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBACORR "1" "November 2015" "gbacorr 5.6.7" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBACORR "1" "August 2017" "gbacorr 5.6.9" "User Commands"
.SH NAME
gbacorr \- Compute auto/cross-correlation coefficients
.SH SYNOPSIS
.B gbacorr
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
Compute auto/cross\-correlation coefficients
.PP
......@@ -50,9 +50,8 @@ this help
.TP
gbacorr \-t 0,2 'file(1)'
first three a.c. coeff. of the first data column
.IP
.TP
gbacorr \-p 0.05 'file(1:2)' x\-corr of the first two columns together with
.IP
their 5% confidence intervals
.SH AUTHOR
Written by Giulio Bottazzi
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBBIN "1" "November 2015" "gbbin 5.6.7" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBBIN "1" "August 2017" "gbbin 5.6.9" "User Commands"
.SH NAME
gbbin \- A program to bin data
.SH SYNOPSIS
.B gbbin
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
Compute binned statistics. Data are read from standard input as records
(X,Y1,Y2,...). Equipopulated bins are built with respect to the first field
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBBOOT "1" "November 2015" "gbboot 5.6.7" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBBOOT "1" "August 2017" "gbboot 5.6.9" "User Commands"
.SH NAME
gbboot \- Bootstrap user provided data
.SH SYNOPSIS
.B gbboot
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
Data bootstrap. Random sampling with replacement or addition
of noise. In the last case the option \fB\-n\fR set the number of
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBCONVTABLE "1" "November 2015" "gbconvtable ver. 5.6" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBCONVTABLE "1" "August 2017" "gbconvtable ver. 5.6" "User Commands"
.SH NAME
gbconvtable \- Replace keys with values
.SH SYNOPSIS
.B gbconvtable
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
Replace keys with values at a given position of the input file. The
name of the dictionary file is provided on the command line with the
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBDIST "1" "November 2015" "gbdist 5.6.7" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBDIST "1" "August 2017" "gbdist 5.6.9" "User Commands"
.SH NAME
gbdist \- Produce cumulative distribution from data
.SH SYNOPSIS
.B gbdist
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
Compute the empirical probability distribution function as
F(x_k) = k/(N+1) where x_k is the k\-th largest observation,
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBDUMMYFY "1" "November 2015" "gbdummyfy ver. 5.6" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBDUMMYFY "1" "August 2017" "gbdummyfy ver. 5.6" "User Commands"
.SH NAME
gbdummyfy \- Produce dummies from labels
.SH SYNOPSIS
.B gbdummyfy
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
This command reads from standard input a text file with space
separated columns. The entry in one column (the first by default) are
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBENV "1" "November 2015" "gbenv 5.6.8" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBENV "1" "September 2017" "gbenv 5.7.0" "User Commands"
.SH NAME
gbenv \- Floating point locale, and gbutils settings
.SH DESCRIPTION
......@@ -33,7 +33,7 @@ Report bugs to <gbutils@googlegroups.com>
.br
Package home page <http://cafim.sssup.it/~giulio/software/gbutils/index.html>
.SH COPYRIGHT
Copyright \(co 2001\-2015 Giulio Bottazzi
Copyright \(co 2001\-2017 Giulio Bottazzi
This program is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License
(version 2) as published by the Free Software Foundation;
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBFILTERNEAR "1" "November 2015" "gbfilternear 5.6.7" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBFILTERNEAR "1" "August 2017" "gbfilternear 5.6.9" "User Commands"
.SH NAME
gbfilternear \- Filter too near data point in Euclidean metric
.SH SYNOPSIS
.B gbfilternear
[\fIoptions\fR]
[\fI\,options\/\fR]
.SH DESCRIPTION
Filter out too near points. Each row represents Cartesian coordinates
of a point in an Euclidean space, whose dimension is set by the number
......
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.44.1.
.TH GBFUN "1" "November 2015" "gbfun 5.6.7" "User Commands"
.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.3.
.TH GBFUN "1" "September 2017" "gbfun 5.6.9" "User Commands"
.SH NAME
gbfun \- Apply functions to table of data