Commit 4efddae7 authored by Nicholas Breen's avatar Nicholas Breen

Update lintian overrides and documentation paths

parent 4b67d65a
gromacs (4.6~beta3-1) experimental; urgency=low gromacs (4.6-1) experimental; urgency=low
* New upstream beta release, targeted at experimental. * New upstream release, targeted at experimental during freeze.
- Remove patches/10_release-4-5-patches.patch (obsolete), - Remove patches/10_release-4-5-patches.patch (obsolete),
31_manpages.patch (incorporated upstream). 31_manpages.patch (incorporated upstream).
- Update lintian overrides.
-- Nicholas Breen <nbreen@debian.org> Sun, 23 Dec 2012 10:57:16 -0800 -- Nicholas Breen <nbreen@debian.org> Mon, 25 Feb 2013 10:47:14 -0800
gromacs (4.5.5-2) unstable; urgency=low gromacs (4.5.5-2) unstable; urgency=low
......
...@@ -4,7 +4,7 @@ Priority: extra ...@@ -4,7 +4,7 @@ Priority: extra
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org> Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Uploaders: Nicholas Breen <nbreen@debian.org> Uploaders: Nicholas Breen <nbreen@debian.org>
Build-Depends: debhelper (>= 7.0.0), libfftw3-dev, libmpich2-dev, libopenmpi-dev (>= 1.2.4-5) [alpha amd64 armel armhf i386 ia64 powerpc powerpcspe sparc sparc64 kfreebsd-i386 kfreebsd-amd64 hurd-i386], lesstif2-dev, libx11-dev, zlib1g-dev, libgsl0-dev, gfortran [alpha], libxml2-dev, cmake, hardening-wrapper Build-Depends: debhelper (>= 7.0.0), libfftw3-dev, libmpich2-dev, libopenmpi-dev (>= 1.2.4-5) [alpha amd64 armel armhf i386 ia64 powerpc powerpcspe sparc sparc64 kfreebsd-i386 kfreebsd-amd64 hurd-i386], lesstif2-dev, libx11-dev, zlib1g-dev, libgsl0-dev, gfortran [alpha], libxml2-dev, cmake, hardening-wrapper
Standards-Version: 3.9.3 Standards-Version: 3.9.4
Homepage: http://www.gromacs.org/ Homepage: http://www.gromacs.org/
Vcs-Browser: http://svn.debian.org/wsvn/debichem/ Vcs-Browser: http://svn.debian.org/wsvn/debichem/
Vcs-Svn: svn://svn.debian.org/svn/debichem/unstable/gromacs/ Vcs-Svn: svn://svn.debian.org/svn/debichem/unstable/gromacs/
......
# demo scripts # demo scripts
gromacs-data: script-not-executable # gromacs-data: script-not-executable
gromacs-mpich: package-name-doesnt-match-sonames gromacs-mpich: package-name-doesnt-match-sonames
shlib-with-executable-stack # Adaptive Resolution Molecular Dynamics Simulation
gromacs-mpich: spelling-error-in-binary usr/lib/libgmxpreprocess_mpi.mpich.so.6 AdResS Address
gromacs-mpich: spelling-error-in-binary usr/lib/libgmxpreprocess_mpi_d.mpich.so.6 AdResS Address
gromacs-mpich: spelling-error-in-binary usr/lib/libmd_mpi.mpich.so.6 AdResS Address
gromacs-mpich: spelling-error-in-binary usr/lib/libmd_mpi_d.mpich.so.6 AdResS Address
gromacs-openmpi: package-name-doesnt-match-sonames gromacs-openmpi: package-name-doesnt-match-sonames
shlib-with-executable-stack # Adaptive Resolution Molecular Dynamics Simulation
gromacs-openmpi: spelling-error-in-binary usr/lib/libgmxpreprocess_mpi.openmpi.so.6 AdResS Address
gromacs-openmpi: spelling-error-in-binary usr/lib/libgmxpreprocess_mpi_d.openmpi.so.6 AdResS Address
gromacs-openmpi: spelling-error-in-binary usr/lib/libmd_mpi.openmpi.so.6 AdResS Address
gromacs-openmpi: spelling-error-in-binary usr/lib/libmd_mpi_d.openmpi.so.6 AdResS Address
# no need to split out the libraries into separate lib packages, # no need to split out the libraries into separate lib packages,
# since no other package uses them # since no other package uses them
gromacs: package-name-doesnt-match-sonames gromacs: package-name-doesnt-match-sonames
# ASM loops on libgmx[_d].so # Adaptive Resolution Molecular Dynamics Simulation
gromacs: shlib-with-executable-stack gromacs: spelling-error-in-binary usr/bin/grompp AdResS Address
gromacs: spelling-error-in-binary usr/bin/grompp_d AdResS Address
gromacs: spelling-error-in-binary usr/lib/libgmxpreprocess.so.6 AdResS Address
gromacs: spelling-error-in-binary usr/lib/libgmxpreprocess_d.so.6 AdResS Address
gromacs: spelling-error-in-binary usr/lib/libmd.so.6 AdResS Address
gromacs: spelling-error-in-binary usr/lib/libmd_d.so.6 AdResS Address
...@@ -134,14 +134,9 @@ install: build install-basic install-mpich install-openmpi ...@@ -134,14 +134,9 @@ install: build install-basic install-mpich install-openmpi
dh_testroot dh_testroot
dh_prep -pgromacs-data -pgromacs-dev dh_prep -pgromacs-data -pgromacs-dev
# remove a duplicated file
rm -f $(CURDIR)/debian/gromacs/usr/share/gromacs/tutor/gmxdemo/demo_d
dh_installdirs -pgromacs-data dh_installdirs -pgromacs-data
mv $(CURDIR)/debian/gromacs/usr/share/gromacs/top \ mv $(CURDIR)/debian/gromacs/usr/share/gromacs/top \
$(CURDIR)/debian/gromacs-data/usr/share/gromacs $(CURDIR)/debian/gromacs-data/usr/share/gromacs
mv $(CURDIR)/debian/gromacs/usr/share/gromacs/tutor \
$(CURDIR)/debian/gromacs-data/usr/share/gromacs
mv $(CURDIR)/debian/gromacs/usr/share/gromacs/html \ mv $(CURDIR)/debian/gromacs/usr/share/gromacs/html \
$(CURDIR)/debian/gromacs-data/usr/share/doc/gromacs $(CURDIR)/debian/gromacs-data/usr/share/doc/gromacs
mv $(CURDIR)/debian/gromacs/usr/share/man \ mv $(CURDIR)/debian/gromacs/usr/share/man \
...@@ -170,6 +165,8 @@ ifneq (,$(findstring $(DEB_HOST_ARCH),$(OPENMPI_ARCH))) ...@@ -170,6 +165,8 @@ ifneq (,$(findstring $(DEB_HOST_ARCH),$(OPENMPI_ARCH)))
mv $(CURDIR)/debian/gromacs-openmpi/usr/lib/*.so $(CURDIR)/debian/gromacs-dev/usr/lib mv $(CURDIR)/debian/gromacs-openmpi/usr/lib/*.so $(CURDIR)/debian/gromacs-dev/usr/lib
endif endif
mv $(CURDIR)/debian/gromacs/usr/share/gromacs/template $(CURDIR)/debian/gromacs-dev/usr/share/gromacs/template mv $(CURDIR)/debian/gromacs/usr/share/gromacs/template $(CURDIR)/debian/gromacs-dev/usr/share/gromacs/template
# remaining documentation catch-all
mv $(CURDIR)/debian/gromacs/usr/share/gromacs/* $(CURDIR)/debian/gromacs-data/usr/share/doc/gromacs
-rmdir $(CURDIR)/debian/gromacs/usr/share/gromacs -rmdir $(CURDIR)/debian/gromacs/usr/share/gromacs
......
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