Commit 9368c2f9 authored by Dirk Eddelbuettel's avatar Dirk Eddelbuettel

Import Debian changes 2.15.2-1

r-base (2.15.2-1) unstable; urgency=low

  * New upstream release

  * src/library/tools/R/install.R: Pass "perl = TRUE" parameter to sub()
    function when defining SHLIB_* macros to work-around an erroneus
    string replacement which causes build failures on arm* architectures
    but make the change conditonal on actually being on arm*. 
parents 0b884afd 8a02ae8d

Too many changes to show.

To preserve performance only 1000 of 1000+ files are displayed.

......@@ -20,7 +20,7 @@ DISTFILES = $(INSTFILES) \
SUBDIRS = m4 tools doc etc share src tests @USE_NLS_TRUE@ po
SUBDIRS_WITH_NO_BUILD = @USE_NLS_FALSE@ po
all: Makefile Makeconf R docs recommended svn-vignettes
all: Makefile Makeconf R docs recommended vignettes
recommended: @USE_RECOMMENDED_PACKAGES_TRUE@ stamp-recommended
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
......@@ -74,15 +74,10 @@ FORCE:
stamp-recommended: R docs
@(cd src/library/Recommended && $(MAKE))
## One of the grid vignettes requires lattice
vignettes: stamp-recommended
@(cd src/library && $(MAKE) $@)
## One of the grid vignettes requires lattice
svn-vignettes: stamp-recommended
-@if test -f "non-tarball"; then \
(cd src/library && $(MAKE) vignettes); \
fi
install install-strip: installdirs svnonly
@for d in $(SUBDIRS); do \
(cd $${d} && $(MAKE) $@) || exit 1; \
......
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Revision: 59600
Last Changed Date: 2012-06-22
Revision: 61015
Last Changed Date: 2012-10-26
Roasted Marshmallows
Trick or Treat
This diff is collapsed.
......@@ -411,6 +411,10 @@ AC_ARG_WITH([jpeglib],
[AS_HELP_STRING([--with-jpeglib],[use jpeglib library (if available) @<:@yes@:>@])],
[R_ARG_USE(jpeglib)],
[use_jpeglib=yes])
AC_ARG_WITH([libtiff],
[AS_HELP_STRING([--with-libtiff],[use libtiff library (if available) @<:@yes@:>@])],
[R_ARG_USE(libtiff)],
[use_libtiff=yes])
AC_ARG_WITH([system-zlib],
[AS_HELP_STRING([--with-system-zlib],[use system zlib library (if available) @<:@no@:>@])],
[R_ARG_USE_SYSTEM(zlib)],
......
r-base (2.15.2-1) unstable; urgency=low
* New upstream release
* src/library/tools/R/install.R: Pass "perl = TRUE" parameter to sub()
function when defining SHLIB_* macros to work-around an erroneus
string replacement which causes build failures on arm* architectures
but make the change conditonal on actually being on arm*.
-- Dirk Eddelbuettel <edd@debian.org> Fri, 26 Oct 2012 06:17:58 -0500
r-base (2.15.1-5) unstable; urgency=low
* debian/control: Switch Build-Depends: from openjdk-6-jdk to default-jdk
......
......@@ -2,7 +2,8 @@
COPYRIGHT STATUS
The bulk of this code is copyright by members of or all of the R Core
Team.
Team. ('The R Core Team' in copyright statements in individual files
refers to some or all of the team.)
See the file COPYING for the exact conditions under which you may
redistribute it. R as a whole is distributed under GPL version 2 or
......@@ -47,7 +48,7 @@ From the announcement of the change (2001-Feb-05)
We encourage packages to be distributed under Open Source conditions,
but accept that this is not possible for some contributions. Our
intention is that export files and import libraries be `accessors'
intention is that export files and import libraries be 'accessors'
under clause 5 of the LGPL, so that in most cases no (additional)
restrictions are imposed by compiling a package using the LGPL-ed
components of R.
......@@ -95,7 +96,7 @@ src/library/grDevices/inst/afm/CM_*.afm
src/library/grDevices/inst/afm/cm*.afm
are derived from afms which are copyright by the American
Mathematical Society, but `the AMS does require that the
Mathematical Society, but 'the AMS does require that the
AMS copyright notice be removed from any derivative versions
of the fonts which have been altered in any way'.
......@@ -147,9 +148,12 @@ src/library/datasets/man/lh.Rd
src/library/datasets/man/rock.Rd
src/library/datasets/man/UKLungDeaths.Rd
src/library/datasets/man/USAccDeaths.Rd
src/library/stats/R/add.R
src/library/stats/R/bandwidths.R
src/library/stats/R/confint.R
src/library/stats/R/cpgram.R
src/library/stats/R/spectrum.R
src/library/stats/R/vcov.R
src/library/stats/src//bandwidths.c
src/appl/maxcol.c
......@@ -174,11 +178,6 @@ src/library/stats/src/PPsum.c
Copyright (C) 1997-1999 Adrian Trapletti
src/library/stats/src/carray.c, mburg.c, myw.c, qr.c
Copyright (C) 1999 Martyn Plummer
src/library/stats/R/nls.R
In part, Copyright 1999-1999 Saikat DebRoy
......@@ -188,7 +187,7 @@ src/library/stats/R/nlsFunc.R
src/library/stats/R/selfStart.R
src/library/stats/R/zzModels.R
Copyright 1997,1999 Jose C. Pinheiro
Copyright 1997,1999 Jose C. Pinheiro, Douglas M. Bates
src/library/stats/R/runmed.R
src/library/stats/src/Trunmed.c
......@@ -200,6 +199,10 @@ src/library/stats/src/loessf.f
In part Copyright (c) 1989, 1992 by AT&T
src/library/stats/R/spline.R
In part, Copyright (C) 2002 Simon N. Wood
src/library/tcltk/exec/{hierarchy,util*,widget}.tcl
Copyright (c) various dates Jeffrey Hobbs
......@@ -216,8 +219,7 @@ src/library/stats/src/nscor.c
src/library/stats/src/prho.c
src/library/stats/src/swilk.c
src/library/stats/src/kmns.f
src/library/ts/src/starma.c
src/nmath/pgamma.c
src/library/stats/src/starma.c
src/nmath/pnbeta.c
src/nmath/pnchisq.c
src/nmath/pnt.c
......@@ -225,14 +227,13 @@ src/nmath/qbeta.c
src/nmath/qgamma.c
src/nmath/qnorm.c
src/nmath/qtukey.c
src/nmath/sunif.c
are based in whole or in part on Applied Statistics algorithms
(C) Royal Statistical Society
src/nmath/stirlerr.c
src/nmath/dbinom.c
src/nmath/dpois.c
are partly based on Clive Loader's (1999) work,
are partly based on Catherine/Clive Loader's (1999) work,
(C) 1999-2000 Lucent Technologies, Bell Laboratories.
......@@ -261,18 +262,21 @@ src/main/xspline.c
* notice remain intact.
src/modules/lapack/dlapack[0123].f, cmplx.f, dlamc.f
src/modules/lapack/dlapack.f, cmplx.f, dlamc.f
Extracted from
* -- LAPACK routine (version 3.1) --
* Univ. of Tennessee, Univ. of California Berkeley, NAG Ltd.,
* Courant Institute, Argonne National Lab, and Rice University
* -- LAPACK computational routine (version 3.4.0) --
* -- LAPACK is a software package provided by Univ. of Tennessee, --
* -- Univ. of California Berkeley, Univ. of Colorado Denver and NAG Ltd..--
* November 2011
where the version number and date vary by subroutine.
The README says
The LAPACK README says
It is freely-available software, and is copyrighted.
although no actual copyright statement appears in the code.
but no copyright statements appear in the sources.
src/extra/xdr/*
......@@ -466,3 +470,20 @@ From GNU coreutils 8.12
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
Some of the files in src/appl were originally taken from the Netlib
archive now at www.netlib.org and do not clearly state their
authorship, let alone copyright status.
src/appl/eigen.f is part of EISPACK: it says
'Questions and comments should be directed to Burton S. Garbow' but
the original authors (in ALGOL) appear to be Bowdler, Martin, Parlett,
Peters, Reinsch and Wilkinson
src/appl/{dchdc,dpfa,dpbsl,dpoco,dpodi,dpofa,dposl,dqrdc,
dqrsl,dsvdc,dtrco,dtrsl}.f
are part of LINPACK, with authors J.J. Dongarra, Cleve Moler and
G.W. Stewart
......@@ -25,19 +25,20 @@ Chile,Chile,Santiago,http://dirichlet.mat.puc.cl/,"Pontificia Universidad Catoli
"Colombia (Cali)",Colombia,Cali,http://www.icesi.edu.co/CRAN/,"Icesi University","adminred # Icesi.edu.co",1,co
Denmark,Denmark,Aalborg,http://mirrors.dotsrc.org/cran/,"dotsrc.org, Aalborg","mirror # dotsrc.org",1,dk
Ecuador,Ecuador,Guayaquil,http://cran.espol.edu.ec/,"Escuela Superior Politecnica del Litoral","jrodrig # espol.edu.ec",1,ec
"France (Toulouse)",France,Toulouse,http://cran.cict.fr/,"CICT, Toulouse","David Allouche <allouche # tlse.toulouse.inra.fr>",1,fr
"France (Toulouse)",France,Toulouse,http://cran.cict.fr/,"CICT, Toulouse","David Allouche <allouche # tlse.toulouse.inra.fr>",0,fr
"France (Lyon 1)",France,Lyon,http://cran.univ-lyon1.fr/,"Dept. of Biometry & Evol. Biology, University of Lyon","Jean Thioulouse <Jean.Thioulouse # univ-lyon1.fr>",1,fr
"France (Lyon 2)",France,Lyon,http://mirror.ibcp.fr/pub/CRAN/,"CNRS IBCP, Lyon","alexis.michon # ibcp.fr",1,fr
"Germany (Berlin)",Germany,Berlin,http://mirrors.softliste.de/cran/,"Softliste.de, Berlin","docko # docko.sk",1,de
"Germany (Goettingen)",Germany,Goettingen,http://ftp5.gwdg.de/pub/misc/cran/,"GWDG Goettingen","Eberhard Moenkeberg <emoenke # gwdg.de>",1,de
"Germany (Wiesbaden)",Germany,Wiesbaden,http://ftp.yalwa.org/cran/,"Yalwa GmbH, Wiesbaden","webmaster # yalwa.com",1,de
"Germany (Wiesbaden)",Germany,Wiesbaden,http://ftp.yalwa.org/cran/,"Yalwa GmbH, Wiesbaden","webmaster # yalwa.com",0,de
Greece,Greece,Crete,http://cran.cc.uoc.gr/,"University of Crete","mirrors # Cc.uoc.gr",1,gr
Hungary,Hungary,Budapest,http://cran.rapporter.net/,"Rapporter.net, Budapest","Daróczi Gergely <gergely # snowl.net>",1,hu
India,India,Chennai,http://ftp.iitm.ac.in/cran/,"Indian Institute of Technology Madras","sriram # iitm.ac.in",1,in
"Indonesia (Jakarta 1)",Indonesia,Jakarta,http://cran.cermin.lipi.go.id/,"Indonesian Institute of Sciences","mirror # Teori.fisika.lipi.go.id",1,id
"Indonesia (Jakarta 2)",Indonesia,Jakarta,http://cran.repo.bppt.go.id/,"Agency for The Application and Assessment of Technology","Imam Cartealy <icx # biotek.bppt.go.id>",1,id
"Indonesia (Jakarta 1)",Indonesia,Jakarta,http://cran.cermin.lipi.go.id/,"Indonesian Institute of Sciences","mirror # Teori.fisika.lipi.go.id",0,id
Indonesia,Indonesia,Jakarta,http://cran.repo.bppt.go.id/,"Agency for The Application and Assessment of Technology","Imam Cartealy <icx # biotek.bppt.go.id>",1,id
Iran,Iran,Mashhad,http://cran.um.ac.ir/,"Ferdowsi University of Mashhad","Majid Sarmad <sarmad # um.ac.ir>",1,ir
Ireland,Ireland,Dublin,http://ftp.heanet.ie/mirrors/cran.r-project.org/,"HEAnet, Dublin","Brian McArdle <brian.mcardle # heanet.ie>",1,ie
"Italy (Milano)",Italy,Milano,http://rm.mirror.garr.it/mirrors/CRAN/,"Garr Mirror, Milano","mirror-service # garr.it",1,it
"Italy (Milano)",Italy,Milano,http://cran.mirror.garr.it/mirrors/CRAN/,"Garr Mirror, Milano","mirror-service # garr.it",1,it
"Italy (Padua)",Italy,Padua,http://cran.stat.unipd.it/,"University of Padua","cran # stat.unipd.it",1,it
"Italy (Palermo)",Italy,Palermo,http://dssm.unipa.it/CRAN/,"Universita degli Studi di Palermo","elio.mineo # dssm.unipa.it, alf # dssm.unipa.it",1,it
"Japan (Hyogo)",Japan,Hyogo,http://essrc.hyogo-u.ac.jp/cran/,"Hyogo University of Teacher Education","essrc-cran # hyogo-u.ac.jp",1,jp
......@@ -52,13 +53,13 @@ Latvia,Latvia,Riga,http://mirrors.webhostinggeeks.com/cran/,Webhostinggeeks,"whg
"New Zealand","New Zealand",Auckland,http://cran.stat.auckland.ac.nz/,"University of Auckland","w.schmidt # auckland.ac.nz",1,nz
Norway,Norway,Bergen,http://cran.uib.no/,"University of Bergen","sundrift # It.uib.no",1,no
Philippines,Philippines,"Quezon City",http://cran.stat.upd.edu.ph/,"University of the Philippines and PREGINET","edward.p.santos # Up.edu.ph",1,ph
"Poland (Oswiecim)",Poland,Oswiecim,http://piotrkosoft.net/pub/mirrors/CRAN/,"Piotrkosoft - Data Storage Center","Piotr Maluty <piotr.maluty # gmail.com>",1,pl
"Poland (Oswiecim)",Poland,Oswiecim,http://piotrkosoft.net/pub/mirrors/CRAN/,"Piotrkosoft - Data Storage Center","Piotr Maluty <piotr.maluty # gmail.com>",0,pl
"Poland (Wroclaw)",Poland,Wroclaw,http://r.meteo.uni.wroc.pl/,"University of Wroclaw","Paweł Netzel <netzel # meteo.uni.wroc.pl>",1,pl
Russia,Russia,Moscow,http://cran.gis-lab.info/,GIS-Lab.info,"sim # gis-lab.info",1,ru
Singapore,Singapore,Singapore,http://cran.stat.nus.edu.sg/,"National University of Singapore","Zhang Rong <ccezr # nus.edu.sg>",1,sg
"Slovakia 1",Slovakia,Bratislava,http://cran.fyxm.net/,"FYXM.net, Bratislava","docko # docko.sk",1,sk
"Slovakia 2",Slovakia,Bratislava,http://cran.phphosts.org/,"phphosts.org,Bratislava","admin # Phphosts.org",1,sk
"South Africa","South Africa",Grahamstown,http://cran.ru.ac.za/,"Rhodes University","Jeremy Baxter <J.Baxter at ru.ac.za>",1,za
Slovakia,Slovakia,Bratislava,http://cran.fyxm.net/,"FYXM.net, Bratislava","docko # docko.sk",1,sk
"Slovakia 2",Slovakia,Bratislava,http://cran.phphosts.org/,"phphosts.org,Bratislava","admin # Phphosts.org",0,sk
"South Africa","South Africa",Johannesburg,http://cran.mirror.ac.za,"TENET, Johannesburg","Patrick Holahan <patrickh # tenet.ac.za>",1,za
"Spain (Madrid)",Spain,Madrid,http://cran.es.r-project.org/,"Spanish National Research Network, Madrid","Jose Manuel Macias <jmanuel.macias # rediris.es>",1,es
Sweden,Sweden,Uppsala,http://ftp.sunet.se/pub/lang/CRAN/,"Swedish University Computer Network, Uppsala","Goran Brostrom <gb # stat.umu.se>",1,se
Switzerland,Switzerland,Zuerich,http://stat.ethz.ch/CRAN/,"ETH Zuerich","Martin.Maechler # R-project.org",1,ch
......@@ -74,7 +75,7 @@ Thailand,Thailand,Hatyai,http://mirrors.psu.ac.th/pub/cran/,"Prince of Songkla U
"USA (IA)",USA,Ames,http://streaming.stat.iastate.edu/CRAN/,"Iowa State University, Ames, IA","Ted Peterson <cpterson # iastate.edu>",1,us
"USA (IN)",USA,Bloomington,http://ftp.ussg.iu.edu/CRAN/,"Indiana University","rtadmin # indiana.edu",1,us
"USA (KS)",USA,Lawrence,http://rweb.quant.ku.edu/cran/,"University of Kansas, Lawrence, KS","Paul Johnson <pauljohn # ku.edu>",1,us
"USA (MD)",USA,Bethesda,http://watson.nci.nih.gov/cran_mirror/,"National Cancer Institute, Bethesda, MD","Sean Davis <sdavis2 # mail.nih.gov>",1,us
"USA (MD)",USA,Bethesda,http://watson.nci.nih.gov/cran_mirror/,"National Cancer Institute, Bethesda, MD","Sean Davis <sdavis2 # mail.nih.gov>",0,us
"USA (MI)",USA,Houghton,http://cran.mtu.edu/,"Michigan Technological University, Houghton, MI","Robert Froese <froese # mtu.edu>",1,us
"USA (MO)",USA,"St. Louis",http://cran.wustl.edu/,"Washington University, St. Louis, MO","admartin # wustl.edu",1,us
"USA (OH)",USA,Cleveland,http://cran.case.edu/,"Case Western Reserve University, Cleveland, OH","""Alberto H. Santana"" <ahs4 # case.edu>",1,us
......@@ -83,6 +84,8 @@ Thailand,Thailand,Hatyai,http://mirrors.psu.ac.th/pub/cran/,"Prince of Songkla U
"USA (PA 2)",USA,Pittsburgh,http://cran.mirrors.hoobly.com,"Hoobly Classifieds, Pittsburgh, PA","Peter Grigor <pgrigor # hoobly.com>",1,us
"USA (TN)",USA,"Oak Ridge",http://mirrors.nics.utk.edu/cran/,"National Institute for Computational Sciences, Oak Ridge, TN","help # nics.utk.edu",1,us
"USA (TX 1)",USA,Dallas,http://cran.revolutionanalytics.com,"Revolution Analytics, Dallas, TX","David Smith <david # revolutionanalytics.com>",1,us
"USA (TX 2)",USA,Houston,http://cran.sixsigmaonline.org/,"sixsigmaonline.org, Houston, TX","gosixsigma # gmail.com",1,us
"USA (TX 2)",USA,Houston,http://cran.sixsigmaonline.org/,"sixsigmaonline.org, Houston, TX","gosixsigma # gmail.com",0,us
"USA (WA 1)",USA,Seattle,http://cran.fhcrc.org/,"Fred Hutchinson Cancer Research Center, Seattle, WA","sfalcon # fhcrc.org",1,us
"USA (WA 2)",USA,Bellingham,http://cran.cs.wwu.edu/,"Western Washington University, Bellingham, WA","CS.Support # Wwu.edu",1,us
Venezuela,Venezuela,Valencia,http://camoruco.ing.uc.edu.ve/cran/,"Universidad de Carabobo Venezuela","dir-imyca # uc.edu.ve",1,ve
Vietnam,Vietnam,"Can Tho City",http://cran.vinastat.com/,VinaStat.com,"contact# vinastat.com, lchanh # ctump.edu.vn",1,vn
R FAQ
Frequently Asked Questions on R
Version 2.15.2012-09-19
Version 2.15.2012-10-21
ISBN 3-900051-08-9
Kurt Hornik
......@@ -258,7 +258,7 @@ i386-freebsd, rs6000-ibm-aix, and sparc-sun-solaris.
2.3 What is the current version of R?
=====================================
The current released version is 2.15.1. Based on this
The current released version is 2.15.2. Based on this
`major.minor.patchlevel' numbering scheme, there are two development
versions of R, a patched version of the current release (`r-patched') and
one working towards the next minor or eventually major (`r-devel') releases
......@@ -424,7 +424,7 @@ version of R is released, there may be a delay of up to 2 weeks until the
Fedora RPM becomes publicly available, as it must pass through the
statutory Fedora review process.