debian/changelog

-amap-align (2.2+git20080214.600fc29+dfsg-1) UNRELEASED; urgency=medium
+amap-align (2.2+git20080214.600fc29+dfsg-1) unstable; urgency=medium
 
   [Steffen Moeller]
   * debian/upstream/metadata:
@@ -10,8 +10,13 @@ amap-align (2.2+git20080214.600fc29+dfsg-1) UNRELEASED; urgency=medium
     execute since the example using the JAR is segfaulting
   * Point watch file to automatic conversion of google code to github
   * Remove *.jar from upstream source
+  * debhelper 11
+  * Point Vcs fields to salsa.debian.org
+  * Standards-Version: 4.1.5
+  * d/rules: do not parse d/changelog
+  * mention automatically converted github page as homepage
 
- -- Andreas Tille <tille@debian.org>  Fri, 05 Aug 2016 09:12:43 +0200
+ -- Andreas Tille <tille@debian.org>  Sun, 15 Jul 2018 15:21:21 +0200
 
 amap-align (2.2-6) unstable; urgency=medium
 

debian/compat

-9
+11

debian/control

@@ -4,11 +4,11 @@ Uploaders: Charles Plessy <plessy@debian.org>,
            Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 9)
-Standards-Version: 4.1.3
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/amap-align.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/amap-align.git
-Homepage: http://code.google.com/p/amap-align/
+Build-Depends: debhelper (>= 11~)
+Standards-Version: 4.1.5
+Vcs-Browser: https://salsa.debian.org/med-team/amap-align
+Vcs-Git: https://salsa.debian.org/med-team/amap-align.git
+Homepage: https://github.com/mes5k/amap-align
 
 Package: amap-align
 Architecture: any

debian/patches/rename-amap.diff

-Since version 2.0-2, this patch is not applied anymore, because the old
-amap package related to networking has been removed from Debian.
---- a/align/Amap.cc
-+++ b/align/Amap.cc
-@@ -660,7 +660,12 @@
-          << "files README and README.PROBCONS for details." << endl
-          << endl
-          << "Usage:" << endl
--         << "       amap [OPTION]... [MFAFILE]..." << endl
-+         << "       amap-align [OPTION]... [MFAFILE]..." << endl
-+         << endl
-+         << "Note:" << endl
-+         << "On Debian systems, amap is renamed amap-align because there is already" << endl
-+         << "an amap program in our archives. On other systems, it is possible that " << endl
-+         << "you will find this program under its original amap name." << endl
-          << endl
-          << "Description:" << endl
-          << "       Align sequences in MFAFILE(s) and print result to standard output" << endl

debian/rules

 #!/usr/bin/make -f
 # -*- makefile -*-
 
+include /usr/share/dpkg/default.mk
+
 export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 
 XP=xsltproc  \
@@ -10,11 +12,10 @@ XP=xsltproc  \
       -''-param make.single.year.ranges "1" \
       -o debian/
 
-pkg := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
 SRCDIR=align
 
 %:
-	dh $@ --sourcedirectory=$(SRCDIR) --parallel
+	dh $@ --sourcedirectory=$(SRCDIR)
 
 override_dh_auto_build:
 	dh_auto_build
@@ -26,4 +27,4 @@ override_dh_auto_build:
 
 override_dh_installexamples:
 	dh_installexamples
-	chmod 644 debian/$(pkg)/usr/share/doc/$(pkg)/examples/BB12020.tfa
+	chmod 644 debian/$(DEB_SOURCE)/usr/share/doc/$(DEB_SOURCE)/examples/BB12020.tfa

debian/source/lintian-overrides

-# this is not reference to an not existing URL but the documentation that the URL does not exist
-amap-align source: obsolete-url-in-packaging debian/watch http://code.google.com/p/amap-align/