debian/changelog

+art-nextgen-simulation-tools (20160605+dfsg-3) unstable; urgency=medium
+
+  * debhelper 11
+  * Point Vcs fields to salsa.debian.org
+  * Standards-Version: 4.1.5
+  * Fix watch file
+  * do not parse d/changelog
+
+ -- Andreas Tille <tille@debian.org>  Sun, 29 Jul 2018 06:19:35 +0200
+
 art-nextgen-simulation-tools (20160605+dfsg-2) unstable; urgency=medium
 
   * Make sure tests will not use the .pl suffixed script

debian/compat

-10
+11

debian/control

@@ -3,12 +3,11 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.
 Uploaders: Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 10),
-               dh-autoreconf,
+Build-Depends: debhelper (>= 11~),
                libgsl-dev
-Standards-Version: 3.9.8
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/art-nextgen-simulation-tools.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/art-nextgen-simulation-tools.git
+Standards-Version: 4.1.5
+Vcs-Browser: https://salsa.debian.org/med-team/art-nextgen-simulation-tools
+Vcs-Git: https://salsa.debian.org/med-team/art-nextgen-simulation-tools.git
 Homepage: http://www.niehs.nih.gov/research/resources/software/biostatistics/art/
 
 Package: art-nextgen-simulation-tools

debian/rules

 #!/usr/bin/make -f
 
-DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
+include /usr/share/dpkg/default.mk
 
 export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 
 %:
-	dh $@ --with autoreconf
+	dh $@
 
 override_dh_auto_test:
 ifneq (,$(findstring nocheck,$(DEB_BUILD_OPTIONS)))
@@ -23,12 +23,12 @@ override_dh_install-arch:
 	dh_install -a
 	# aln2bed.pl seems to be of general use - the other perl scripts are called by art_profiler_illumina
 	# see patch for the latter regarding PATH to *.pl files
-	mkdir -p debian/$(DEBPKGNAME)/usr/lib/$(DEBPKGNAME)
-	for pl in debian/$(DEBPKGNAME)/usr/bin/*.pl ; do \
+	mkdir -p debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)
+	for pl in debian/$(DEB_SOURCE)/usr/bin/*.pl ; do \
 	    if [ `basename $${pl}` = aln2bed.pl ] ; then \
-		mv $${pl} debian/$(DEBPKGNAME)/usr/bin/`basename $${pl} .pl` ; \
+		mv $${pl} debian/$(DEB_SOURCE)/usr/bin/`basename $${pl} .pl` ; \
 	    else \
-		mv $${pl} debian/$(DEBPKGNAME)/usr/lib/$(DEBPKGNAME) ; \
+		mv $${pl} debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE) ; \
 	    fi ; \
 	done
 
@@ -38,7 +38,7 @@ override_dh_installexamples-arch:
 	    sed -e 's?=\.\./?=/usr/bin/?' \
 	        -e 's?^\.\./?/usr/bin/?' \
 	        -e 's/aln2bed\.pl/aln2bed/' \
-	        $$ex > debian/$(DEBPKGNAME)/usr/share/doc/$(DEBPKGNAME)/examples/`basename $$ex` ; \
+	        $$ex > debian/$(DEB_SOURCE)/usr/share/doc/$(DEB_SOURCE)/examples/`basename $$ex` ; \
 	done
 
 override_dh_installchangelogs:

debian/watch

 version=4
 
-opts="uversionmangle=s/^(\d\d)(\d\d)(\d\d)$/$1.$2.$3/,repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
- http://www.niehs.nih.gov/research/resources/software/biostatistics/art/ .*/artsrc[a-z]*(\d+)linuxtgz\.tgz
-
+opts="uversionmangle=s/\.//g,repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
+ https://www.niehs.nih.gov/research/resources/software/biostatistics/art/ .*/artsrc[a-z]*(\d[\d.]+)linux.*\.tgz