Commit 8e14e3a5 authored Aug 05, 2018 by Andreas Tille

Class FTPSeekableStream should not be excluded

parent 6c87b852

debian/changelog

+2 −1

Original line number	Diff line number	Diff line
		@@ -6,7 +6,8 @@ artemis (17.0.1+dfsg-1) UNRELEASED; urgency=medium
		* debhelper 11
		* Point Vcs fields to salsa.debian.org
		* Standards-Version: 4.2.0
		TODO: Fix build
		* d/rules: use dh_auto_build
		* Class FTPSeekableStream should not be excluded

		-- Andreas Tille <tille@debian.org> Sat, 17 Mar 2018 11:41:38 +0100

debian/patches/samreader.patch

+0 −8

Original line number	Diff line number	Diff line
		@@ -125,14 +125,6 @@ Last-Update: 2016-12-07 23:37:52 +0000
		cnt[0] = (cnt[0] / (((float) mappedReads[j] / 1000000.f) * (fLen / 1000.f)));
		--- a/uk/ac/sanger/artemis/components/alignment/BamView.java
		+++ b/uk/ac/sanger/artemis/components/alignment/BamView.java
		@@ -149,7 +149,6 @@ import uk.ac.sanger.artemis.sequence.Mar
		import uk.ac.sanger.artemis.sequence.NoSequenceException;
		import uk.ac.sanger.artemis.util.Document;
		import uk.ac.sanger.artemis.util.DocumentFactory;
		-import uk.ac.sanger.artemis.util.FTPSeekableStream;
		import uk.ac.sanger.artemis.util.OutOfRangeException;

		/**
		@@ -186,15 +185,15 @@ public class BamView extends JPanel
		private Bases bases;
		private JScrollPane jspView;