Skip to content
Commits on Source (6)
artfastqgenerator (0.0.20150519-3) unstable; urgency=medium
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test
* Do not parse d/changelog
-- Andreas Tille <tille@debian.org> Sun, 29 Jul 2018 05:18:15 +0200
artfastqgenerator (0.0.20150519-2) unstable; urgency=medium
* debhelper 10
......
......@@ -3,12 +3,12 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 10),
Build-Depends: debhelper (>= 11~),
javahelper,
default-jdk
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/artfastqgenerator.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/artfastqgenerator.git
Standards-Version: 4.1.5
Vcs-Browser: https://salsa.debian.org/med-team/artfastqgenerator
Vcs-Git: https://salsa.debian.org/med-team/artfastqgenerator.git
Homepage: https://sourceforge.net/projects/artfastqgen/
Package: artfastqgenerator
......
......@@ -2,18 +2,20 @@
# DH_VERBOSE := 1
DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
include /usr/share/dpkg/default.mk
%:
dh $@ --with javahelper
override_dh_auto_build:
javac -source 1.7 -target 1.7 artificialFastqGenerator/*.java && \
jar -cmf META-INF/MANIFEST.MF $(DEBPKGNAME).jar artificialFastqGenerator/*.class
jar -cmf META-INF/MANIFEST.MF $(DEB_SOURCE).jar artificialFastqGenerator/*.class
override_dh_auto_test:
java -jar $(DEBPKGNAME).jar -R miniReference.fasta -O C1 -S ">1" -E ">" -URQS true -SE true -F1 test1.fastq -F2 test2.fastq
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
java -jar $(DEB_SOURCE).jar -R miniReference.fasta -O C1 -S ">1" -E ">" -URQS true -SE true -F1 test1.fastq -F2 test2.fastq
rm C1.1.fastq C1.2.fastq
endif
get-orig-source:
. debian/get-orig-source