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debian/ballview.doc-base
View file @ 9add9d9f
......@@ -11,5 +11,5 @@ Abstract: BALLView is a free molecular modeling and molecular graphics tool
Section: Science/Chemistry
Format: HTML
Index: /usr/share/doc/ballview/html/index.html
Index: /usr/share/doc/ballview/html/tutorial01.html
Files: /usr/share/doc/ballview/html/*.html
debian/changelog
View file @ 9add9d9f
......@@ -10,9 +10,14 @@ ball (1.5.0+git20180813.37fc53c-1) UNRELEASED; urgency=medium
* Use Git mode in watch file
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* Standards-Version: 4.3.0
* Switch to Qt5
Closes: #874837
* Drop python-ballview package
* Do not fail in case of build time test failures
* d/control: Remove X-Python-Version field
* d/rules: Remove manual CFLAGS settings
* d/rules: Remove cruft from python-ball package
-- Andreas Tille <tille@debian.org> Sun, 23 Dec 2018 16:32:12 +0100
......
debian/control
View file @ 9add9d9f
......@@ -39,11 +39,10 @@ Build-Depends-Indep: doxygen,
texlive-latex-recommended,
texlive-fonts-recommended,
texlive-latex-extra
Standards-Version: 4.2.1
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/ball
Vcs-Git: https://salsa.debian.org/med-team/ball.git
Homepage: http://www.ball-project.org/
X-Python-Version: all
Package: libball1.5-data
Architecture: all
......@@ -157,30 +156,12 @@ Description: Python bindings for the Biochemical Algorithms Library
This package provides scripting access to the VIEW-independent functionality
of the Biochemical Algorithms Library (BALL).
Package: python-ballview
Architecture: any
Section: python
Depends: ${shlibs:Depends},
${python:Depends},
${sip:Depends},
libball1.5,
libballview1.5,
python-ball (= ${binary:Version}),
${misc:Depends}
Description: Python bindings for VIEW-parts of the Biochemical Algorithms Library
BALL (Biochemical Algorithms Library) is an application framework
in C++ that has been specifically designed for rapid software
development in Molecular Modeling and Computational Molecular Biology.
This package provides scripting access to the VIEW-dependent functionality
of the Biochemical Algorithms Library (BALL).
Package: ballview
Architecture: any
Depends: ${shlibs:Depends},
libball1.5,
libballview1.5,
python-ball,
python-ballview,
${misc:Depends}
Description: free molecular modeling and molecular graphics tool
BALLView provides fast OpenGL-based visualization of molecular structures,
......
debian/rules
View file @ 9add9d9f
......@@ -5,12 +5,6 @@ export DH_VERBOSE=1
DPKG_EXPORT_BUILDFLAGS = 1
include /usr/share/dpkg/buildflags.mk
ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
CFLAGS += -O0
else
CFLAGS += -O2
endif
SOVERSION=1.5
BALL_INSTALL_PATH=build
PYTHON_VERSION=2.7
......@@ -31,27 +25,25 @@ export BALL_DATA_PATH=$(CURDIR)/data
# Make sure HOME exists (for Directory_test)
export HOME=/tmp
# Disable test for arch-indep builds
override_dh_auto_test-indep:
# The testsuite fails on almost any non-amd64 port.
# The testsuite issues several failures
# Run it, but ignore the return code for now.
#
# TODO: Improve the portability of code and testsuite.
ifndef DEB_HOST_ARCH
$(warning DEB_HOST_ARCH is not defined. I don't know which \
architecture I'm supposed to build for. \
Expect "interesting" results.)
else ifneq ($(DEB_HOST_ARCH),amd64)
$(warning Building for $(DEB_HOST_ARCH) which is not amd64. \
We will run the test suite, but ignore any errors to prevent FTBFS. \
See Debian bug #830894 for the discussion and how you can help.\
)
override_dh_auto_test-arch:
dh_auto_test --no-parallel --
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
dh_auto_test --no-parallel -- || true
endif
# Different tests are failing in different runs
#The following tests FAILED:
# 86 - Composite_test4 (Failed)
# 87 - Composite_test5 (Failed)
#Errors while running CTest
#The following tests FAILED:
# 112 - Fragment_test (Failed)
# 113 - Chain_test (Failed)
#Errors while running CTest
override_dh_auto_build-arch:
## Fix upstream issue of missing UI files
......@@ -102,12 +94,11 @@ override_dh_auto_install-arch:
debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION) \
debian/libballview$(SOVERSION)/usr/lib \
debian/python-ball/usr/share/BALL-$(SOVERSION) \
debian/python-ball/usr/$(PYTHON_SITE_PATH) \
debian/python-ballview/usr/$(PYTHON_SITE_PATH)
debian/python-ball/usr/$(PYTHON_SITE_PATH)
mkdir -p debian/ballview/usr/share/BALL-$(SOVERSION)/data/graphics
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/BALLView/* debian/ballview/usr/share/doc/ballview/html
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/BALLView/* debian/ballview/usr/share/doc/ballview/
cp $(BALL_INSTALL_PATH)/usr/bin/BALLView debian/ballview/usr/bin/
find $(BALL_INSTALL_PATH)/usr/lib/ -name libBALL*.so.* | xargs -r cp --target-directory debian/libball$(SOVERSION)/usr/lib/
......@@ -117,9 +108,8 @@ override_dh_auto_install-arch:
cp $(BALL_INSTALL_PATH)/usr/share/BALL/graphics/ballview*.xpm debian/ballview/usr/share/pixmaps/
cp -r $(BALL_INSTALL_PATH)/usr/share/doc/BALL/EXAMPLES/PYTHON debian/python-ball/usr/share/BALL-$(SOVERSION)
cp source/PYTHON/EXTENSIONS/BALL.py debian/python-ball/usr/$(PYTHON_SITE_PATH)
cp -a source/PYTHON/EXTENSIONS/* debian/python-ball/usr/$(PYTHON_SITE_PATH)
# cp $(BALL_INSTALL_PATH)/usr/lib/BALLCore.so debian/python-ball/usr/$(PYTHON_SITE_PATH)
# cp $(BALL_INSTALL_PATH)/usr/lib/VIEW.so debian/python-ballview/usr/$(PYTHON_SITE_PATH)
# -dev packages are arch dependent
mkdir -p debian/libball$(SOVERSION)-dev/usr/lib \
......@@ -142,16 +132,17 @@ override_dh_auto_install-arch:
override_dh_auto_install-indep:
mkdir -p debian/libball$(SOVERSION)-doc/usr/share/doc/libball$(SOVERSION)/html \
debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc \
debian/libball$(SOVERSION)-doc/usr/share/doc/libball$(SOVERSION)/html/BALL
cp $(BALL_INSTALL_PATH)/usr/share/BALL/doc/TUTORIAL/tutorial.pdf debian/libball$(SOVERSION)-doc/usr/share/doc/libball$(SOVERSION)/
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/doc/classes debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/doc/internal debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
cp $(BALL_INSTALL_PATH)/usr/share/doc/BALL/TUTORIAL/tutorial.pdf debian/libball$(SOVERSION)-doc/usr/share/doc/libball$(SOVERSION)/
# cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/doc/classes debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
# cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/doc/internal debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
# we need the BALLView documentation in the data path as well... sorry for that
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/doc/BALLView debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/doc/BALL debian/libball$(SOVERSION)-doc/usr/share/doc/libball$(SOVERSION)/html
cp -r $(BALL_INSTALL_PATH)/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)/doc
cp -r $(BALL_INSTALL_PATH)/usr/share/doc/BALL/html/* debian/libball$(SOVERSION)-doc/usr/share/doc/libball$(SOVERSION)/html/BALL
cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/data debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)
# cp -r $(BALL_INSTALL_PATH)/usr/share/BALL/data debian/libball$(SOVERSION)-data/usr/share/BALL-$(SOVERSION)
override_dh_installdocs:
dh_installdocs
......@@ -162,3 +153,6 @@ override_dh_installdocs:
override_dh_install:
dh_install
dh_sip
find debian/python-ball/usr/lib/python*/dist-packages/ -name BALLPyMacros.h -delete
find debian/python-ball -name CMakeLists.txt -delete