Loading debian/missing-sources/compare_fasta.py +3 −2 Original line number Diff line number Diff line Loading @@ -7,6 +7,7 @@ fasta2 = sys.argv[2] revcomp = lambda x: ''.join([{'A':'T','C':'G','G':'C','T':'A'}[B] for B in x][::-1]) def normalize(seq): if seq == 'A' or seq == 'C' or seq == 'G' or seq == 'T': rev = revcomp(seq) return min(rev,seq) Loading Loading
debian/missing-sources/compare_fasta.py +3 −2 Original line number Diff line number Diff line Loading @@ -7,6 +7,7 @@ fasta2 = sys.argv[2] revcomp = lambda x: ''.join([{'A':'T','C':'G','G':'C','T':'A'}[B] for B in x][::-1]) def normalize(seq): if seq == 'A' or seq == 'C' or seq == 'G' or seq == 'T': rev = revcomp(seq) return min(rev,seq) Loading