Commit 480104cf authored by Shayan Doust's avatar Shayan Doust
Browse files

Do some key checks as pbuilder hook seemingly messes autopkgtest

parent 377d6017
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+3 −2
Original line number Diff line number Diff line
@@ -7,6 +7,7 @@ fasta2 = sys.argv[2]

revcomp = lambda x: ''.join([{'A':'T','C':'G','G':'C','T':'A'}[B] for B in x][::-1])
def normalize(seq):
    if seq == 'A' or seq == 'C' or seq == 'G' or seq == 'T':
        rev = revcomp(seq)
        return min(rev,seq)