Commit 1b6ac364 authored by Andreas Tille's avatar Andreas Tille
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r-bioc-DEGreport - all pre-depends except edgeR are in new

parent 3cd75c44

debian/TODO

+3 −3
Original line number Diff line number Diff line
@@ -85,10 +85,10 @@ package seqcluster 
       # We cover all CRAN packages

       # Most BioC packages are missing - even edgeR ? :

       r-bioc-edgeR - missing

       r-bioc-HTSFilter - Andreas volunteering

       r-bioc-DEGreport - Andreas volunteering

       r-bioc-HTSFilter - Depends DESeq and edgeR which both in turn depend locfit which makes all non-free

       r-bioc-DEGreport - all pre-depends except edgeR are in new

       # novel packages

       install.github("hbc/CHBUtils") - missing

       install.github("hbc/CHBUtils") - Andreas volunteering

       install.github("lpantano/isomiRs", "master") - missing

       install_github('rstudio/rmarkdown')  -- this may be the same we have from CRAN - not checked