Commit 31c8df20 authored by Steffen Möller's avatar Steffen Möller
Browse files

Updated control, TODO

parent 3a5bfc9a

debian/TODO

+1 −3
Original line number Diff line number Diff line
@@ -32,14 +32,12 @@ Package OptiTypePipeline 


add hisat2_extract_splice_sites.py to the hisat2 package



Pacakge MutliQC

Package MutliQC - in salsa

https://github.com/ewels/MultiQC



package sailfish

https://github.com/kingsfordgroup/sailfish



package stringtie - done: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=924101



package kallisto

rough packaging at https://salsa.debian.org/med-team/kallisto

debian/control

+1 −1
Original line number Diff line number Diff line
@@ -78,12 +78,12 @@ Recommends: bcftools, 
	    samblaster,

            samtools,

            salmon,

            stringtie,

	    subread,

            tabix,

            wget

Suggests: toil,

          cwltool,

          stringtie,

          kallisto,

          bcbio-doc

Description: toolkit for analysing high-throughput sequencing data