build tests bring more dependencies

package lumpy

https://github.com/arq5x/lumpy-sv

package wham

http://research.cs.wisc.edu/wham/

# An easy one:

package tophat-recondition

https://github.com/cbrueffer/tophat-recondition

package qualimap

http://qualimap.bioinfo.cipf.es/

package gffread

https://github.com/gpertea/gffread