Commit b5831fd6 authored by Steffen Möller's avatar Steffen Möller
Browse files

python3-geneimpacts got accepted

parent 8949f2be

debian/TODO

+1 −6
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@@ -28,11 +28,6 @@ package bamtofastq from biobambam2 


package kallisto (in new queue)



package Python module geneimpacts

   https://pypi.org/project/geneimpacts/

   https://github.com/brentp/geneimpacts

   https://salsa.debian.org/med-team/python-geneimpacts (in new queue)



package pizzly

   https://github.com/pmelsted/pizzly (in new queue)
@@ -96,7 +91,7 @@ package viennarna 
       The package now has a custom license file - redistributable but non-free.

    Needed for testing seqcluster.

	Steffen revisits ViennaRNA, will update to new upstream version this weekend

           Does not compile - source tree seems incomplete (RNAfold_cmdl.c missing)

           Does not compile

           External dependencies json (in Debian, I think, can otherwise be deconfigured) and cthreadpool (not yet in Debian) need to be addressed



package cthreadpool

debian/control

+1 −0
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@@ -32,6 +32,7 @@ Build-Depends: debhelper (>= 10), 
               picard,

               python3-biopython,

               python3-cyvcf2,

               python3-geneimpacts,

               python3-logbook,

               python3-nose,

               python3-requests,