Commit e52b1511 authored by Steffen Möller's avatar Steffen Möller
Browse files

Update for newly packaged StringTie

parent 7b98f981

debian/TODO

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@@ -37,9 +37,7 @@ https://github.com/ewels/MultiQC 
package sailfish

https://github.com/kingsfordgroup/sailfish



package stringtie

http://ccb.jhu.edu/software/stringtie/

http://ccb.jhu.edu/software/stringtie/dl/stringtie-1.3.5.tar.gz

package stringtie - done: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=924101



package kallisto

debian/changelog

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bcbio (1.1.3-1) UNRELEASED; urgency=medium

bcbio (1.1.3-1) unstable; urgency=medium



  * Team upload.

  * New upstream release.

debian/control

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@@ -77,10 +77,14 @@ Recommends: bcftools, 
	    sambamba,

	    samblaster,

            samtools,

            salmon,

	    subread,

            tabix,

            wget

Suggests: toil, cwltool,

Suggests: toil,

          cwltool,

          stringtie,

          kallisto,

          bcbio-doc

Description: toolkit for analysing high-throughput sequencing data

 This package installs the command line tools of the bcbio-nextgen