Commit ec6be756 authored by Steffen Möller's avatar Steffen Möller
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update seqcluster loses amcharts

parent 4b7d837d
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+2 −1
Original line number Diff line number Diff line
@@ -75,7 +75,7 @@ package seqcluster
       ./.travis.yml:- conda install --yes -c conda-forge -c bioconda memory_profiler openjdk pysam pybedtools pandas numpy biopython progressbar2 pyyaml bedtools samtools mirtop viennarna -q
      so, for some successful testing it seems like we need viennarna, still. That is not yet in the distribution. If truly dependending on it then bcbio ends up in contrib.

     seqcluster redistributes a "Free as in beer" graph library in its source tree at ./misc/js/amcharts.js that upstream accepts to be substituted with references to the online location in a CDN.  Steffen will address that. Downside of it all: seqcluster needs to go to contrib.
     seqcluster accepted a patch to eliminate a "Free as in beer" graph library from its source tree at ./misc/js/amcharts.js. These are now references to the online location in a CDN.

     Additional requirements:
      python3-dateutils (not yet packaged)
@@ -113,6 +113,7 @@ package Scribl
  http://chmille4.github.io/Scribl/
    A surprisingly neat JavaScript library to show genomic features
       Needed for seqcluster
    Steffen addresses packaging this JS library from 2012

package gjh_asl_json
  https://github.com/ghackebeil/gjh_asl_json