Commit 2382d551 authored by Dylan Aïssi's avatar Dylan Aïssi
Browse files

During build copy *.java files in SRC/ to avoid problem with jh_build

parent f27e07af

debian/changelog

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beagle (4.1~180127+dfsg-2) UNRELEASED; urgency=medium



  * During build copy *.java files in SRC/ to avoid problem with jh_build.



 -- Dylan Aïssi <bob.dybian@gmail.com>  Sun, 22 Apr 2018 00:23:59 +0200



beagle (4.1~180127+dfsg-1) unstable; urgency=medium



  [ Steffen Moeller ]

debian/clean

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SRC/

debian/rules

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@@ -7,11 +7,10 @@ export CLASSPATH=/usr/share/java/htsjdk.jar 
	dh $@ --with javahelper



override_jh_build:

	# This ugly thing below because jh_build search .java files in .pc folder so FTBFS...

	rm -rf $(CURDIR)/.pc/

	jh_build --javacopts="-source 1.8" --javadoc-opts="-source 1.8" --main="main.Main" beagle.jar $(CURDIR)

	jh_build --javacopts="-source 1.8" --javadoc-opts="-source 1.8" --main="vcf.Bref" bref.jar $(CURDIR)

	mkdir SRC/

	cp -t SRC/ -r beagleutil blbutil dag haplotype ibd main sample vcf

	jh_build --javacopts="-source 1.8" --javadoc-opts="-source 1.8" --main="main.Main" beagle.jar SRC/

	jh_build --javacopts="-source 1.8" --javadoc-opts="-source 1.8" --main="vcf.Bref" bref.jar SRC/



override_dh_installchangelogs:

	dh_installchangelogs debian/upstream.docs/release_notes