debian/patches/tests_use_installed_binaries.patch

+Author: Shayan Doust
+Last-Update: 2019-09-13 20:40:49 +0100
+Description: use the installed binaries instead of the locally generated ones
+
 Index: bedops/tests/starch/Makefile
 ===================================================================
 --- bedops.orig/tests/starch/Makefile	2019-09-13 19:28:55.216495617 +0100

debian/patches/use_debian_libs

@@ -5,7 +5,7 @@ Last-Update: 2017-01-13
 Forwarded: no
 --- a/interfaces/src/data/starch/starchFileHelpers.c
 +++ b/interfaces/src/data/starch/starchFileHelpers.c
-@@ -178,7 +178,7 @@ STARCH_gzip_deflate(FILE *source, FILE *
+@@ -194,7 +194,7 @@ STARCH_gzip_deflate(FILE *source, FILE *
      /* deflateInit2 allows creation of archive with gzip header, i.e. a gzip file */
      /* cf. http://www.zlib.net/manual.html */
  #ifdef __cplusplus
@@ -122,7 +122,7 @@ Forwarded: no
  
 --- a/applications/bed/starch/src/starchcat.c
 +++ b/applications/bed/starch/src/starchcat.c
-@@ -5542,7 +5542,7 @@ STARCHCAT2_setupGzipOutputStream(z_strea
+@@ -6177,7 +6177,7 @@ STARCHCAT2_setupGzipOutputStream(z_strea
  
      /* cf. http://www.zlib.net/manual.html for level information */
  #ifdef __cplusplus