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Commits on Source (5)
Add build-dep on libjaxb-api-java and libjaxb-java
· b8a43ad7
Tony Mancill
authored
Jan 11, 2019
and
Andreas Tille
committed
Jan 14, 2019
b8a43ad7
Add jaxb-api and jaxb-impl JARs to classpaths in debian/build.xml
· 9afb16e3
Tony Mancill
authored
Jan 11, 2019
and
Andreas Tille
committed
Jan 14, 2019
9afb16e3
Drop --add-modules java.se.ee from javadoc task
· d70e1d5a
Tony Mancill
authored
Jan 11, 2019
and
Andreas Tille
committed
Jan 14, 2019
d70e1d5a
Close bugs
· 84769801
Andreas Tille
authored
Jan 14, 2019
84769801
Upload to unstable
· ad7f5eff
Andreas Tille
authored
Jan 14, 2019
ad7f5eff
Show whitespace changes
Inline
Side-by-side
debian/build.xml
View file @
ad7f5eff
...
...
@@ -28,7 +28,7 @@
<property
environment=
"env"
/>
<property
name=
"project.jarfile.name"
value=
"BJLIB.jar"
/>
<property
name=
"class.path"
value=
"${lib.dir}/commons-logging.jar ${lib.dir}/commons-cli.jar ${lib.dir}/commons-collections3.jar ${lib.dir}/commons-dbcp.jar ${lib.dir}/junit4.jar ${lib.dir}/commons-pool.jar ${lib.dir}/guava.jar ${lib.dir}/jgrapht0.8.jar ${lib.dir}/Jmol.jar /usr/share/icedtea-web/netx.jar ${lib.dir}/hamcrest.jar ${lib.dir}/json_simple.jar ${lib.dir}/commons-codec.jar ${lib.dir}/itext5.jar ${lib.dir}/Jmol.jar ${lib.dir}/log4j2.jar ${lib.dir}/json-simple.jar ${lib.dir}/slf4j-api.jar ${lib.dir}/log4j-over-slf4j.jar ${lib.dir}/commons-math.jar ${lib.dir}/xmlunit.jar ${lib.dir}/vecmath.jar"
/>
<property
name=
"class.path"
value=
"${lib.dir}/commons-logging.jar ${lib.dir}/commons-cli.jar ${lib.dir}/commons-collections3.jar ${lib.dir}/commons-dbcp.jar ${lib.dir}/junit4.jar ${lib.dir}/commons-pool.jar ${lib.dir}/guava.jar ${lib.dir}/jgrapht0.8.jar ${lib.dir}/Jmol.jar /usr/share/icedtea-web/netx.jar ${lib.dir}/hamcrest.jar ${lib.dir}/json_simple.jar ${lib.dir}/commons-codec.jar ${lib.dir}/itext5.jar ${lib.dir}/Jmol.jar ${lib.dir}/log4j2.jar ${lib.dir}/json-simple.jar ${lib.dir}/slf4j-api.jar ${lib.dir}/log4j-over-slf4j.jar ${lib.dir}/commons-math.jar ${lib.dir}/xmlunit.jar ${lib.dir}/vecmath.jar
${lib.dir}/jaxb-api.jar ${lib.dir}/jaxb-impl.jar
"
/>
<path
id=
"compile.classpath"
>
<fileset
dir=
"${lib.dir}"
>
...
...
@@ -52,6 +52,8 @@
<include
name=
"slf4j-api.jar"
/>
<include
name=
"log4j-over-slf4j.jar"
/>
<include
name=
"vecmath.jar"
/>
<include
name=
"jaxb-api.jar"
/>
<include
name=
"jaxb-impl.jar"
/>
</fileset>
<fileset
dir=
"${dist.dir}"
>
<include
name=
"*.jar"
/>
...
...
@@ -73,18 +75,9 @@
<target
name=
"javadocs"
>
<mkdir
dir=
"${docs.dir}"
/>
<mkdir
dir=
"${docs.lib.dir}"
/>
<if><equals
arg1=
"${ant.java.version}"
arg2=
"1.8"
/>
<then>
<javadoc
destdir=
"${docs.lib.dir}"
sourcepath=
"${src.dir}"
packagenames=
"org.*"
encoding=
"UTF-8"
additionalparam=
"-Xdoclint:none"
classpathref=
"compile.classpath"
>
<link
href=
"http://java.sun.com/j2se/1.6.0/docs/api/"
/>
</javadoc>
</then>
<else>
<javadoc
destdir=
"${docs.lib.dir}"
sourcepath=
"${src.dir}"
packagenames=
"org.*"
encoding=
"UTF-8"
additionalparam=
"-Xdoclint:none --add-modules java.se.ee"
classpathref=
"compile.classpath"
>
<link
href=
"http://java.sun.com/j2se/1.6.0/docs/api/"
/>
</javadoc>
</else>
</if>
</target>
<target
name=
"compile"
>
...
...
@@ -128,7 +121,6 @@
</then>
<else>
<junit
haltonfailure=
"yes"
printsummary=
"yes"
fork=
"true"
>
<jvmarg
line=
"--add-modules java.se.ee"
/>
<classpath
refid=
"test.classpath"
/>
<formatter
type=
"plain"
usefile=
"false"
/>
<batchtest>
...
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debian/changelog
View file @
ad7f5eff
biojava4-live (4.2.12+dfsg-1)
UNRELEASED
; urgency=medium
biojava4-live (4.2.12+dfsg-1)
unstable
; urgency=medium
* Team upload.
...
...
@@ -11,9 +11,14 @@ biojava4-live (4.2.12+dfsg-1) UNRELEASED; urgency=medium
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.3.0
TODO: #917655, #917667 (both bugs persist in this version)
-- Andreas Tille <tille@debian.org> Thu, 10 Jan 2019 11:35:04 +0100
[ tony mancill ]
* Add build-dep on libjaxb-api-java and libjaxb-java
* Add jaxb-api and jaxb-impl JARs to classpaths in debian/build.xml
Closes: #917655, #917667
* Drop --add-modules java.se.ee from javadoc task
-- Andreas Tille <tille@debian.org> Mon, 14 Jan 2019 16:05:19 +0100
biojava4-live (4.2.11+dfsg-1) unstable; urgency=medium
...
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debian/control
View file @
ad7f5eff
...
...
@@ -28,7 +28,9 @@ Build-Depends-Indep: libcommons-dbcp-java,
liblog4j2-java,
libslf4j-java,
libxmlunit-java,
libjgrapht-java
libjgrapht-java,
libjaxb-api-java,
libjaxb-java
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/biojava4-live
Vcs-Git: https://salsa.debian.org/med-team/biojava4-live.git
...
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