Commit 303181c6 authored by Charles Plessy's avatar Charles Plessy

New upstream release.

 * debian/rules:
   - Disabled installation of examples (removed upstream).
   - Removed the correction of file permission of Pise documentation
     (removed upstream).
   - Replaced `dh_clean -k` by dephelper 7's `dh_prep`.
   - Removed patching facilities (no patches anymore).
 * debian/copyright:
   - Removed vanity lines about debianization.
   - Incremented years to 2009.
   - Updated to latest version of the machine-readable format.
 * debian/control:
   - Incremented Standards-Version to reflect conformance on new Policy
     (no changes needed).
   - Removed build-dependancy on quilt (no patches anymore).
parent 63d4ddbc
bioperl-run (1.5.9.1-1) UNRELEASED; urgency=low
bioperl-run (1.6.1-1) unstable; urgency=low
* New upstream release.
* debian/patches/10-wrong-path-for-interpreter.patch: removed
(fixed upstream).
* debian/watch updated (bioperl -> BioPerl).
* debian/rules: disabled installation of examples (removed Upstream).
* debian/rules:
- Disabled installation of examples (removed upstream).
- Removed the correction of file permission of Pise documentation
(removed upstream).
- Replaced `dh_clean -k` by dephelper 7's `dh_prep`.
- Removed patching facilities (no patches anymore).
* debian/copyright:
- Removed vanity lines about debianization.
- Incremented years to 2009.
- Updated to latest version of the machine-readable format.
* debian/control:
- Incremented Standards-Version to reflect conformance on new Policy
(no changes needed).
- Removed build-dependancy on quilt (no patches anymore).
-- Charles Plessy <plessy@debian.org> Fri, 14 Nov 2008 13:13:47 +0900
-- Charles Plessy <plessy@debian.org> Tue, 31 Mar 2009 20:29:19 +0900
bioperl-run (1.5.2.100-1) unstable; urgency=low
......
Source: bioperl-run
Section: science
Priority: optional
Build-Depends: debhelper (>= 7), quilt, libmodule-build-perl
Build-Depends: debhelper (>= 7), libmodule-build-perl
Build-Depends-Indep: perl (>= 5.6.1), bioperl
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <plessy@debian.org>
Standards-Version: 3.8.0
Standards-Version: 3.8.1
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bioperl-run/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/bioperl-run/trunk/
Homepage: http://www.bioperl.org/wiki/Run_package
......
Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat?action=recall&rev=311
Upstream-Name: bioperl-run
Upstream-Maintainer: Bioperl Team <bioperl-l@bioperl.org>
Upstream-Source: http://bioperl.org/DIST/bioperl-run-1.5.2_100.tar.gz
X-Packaged-By: Charles Plessy <plessy@debian.org>
X-Packaged-Date: Sun, 09 Nov 2008 22:03:31 +0900
Name: BioPerl-run
Maintainer: Bioperl Team <bioperl-l@bioperl.org>
Source: http://www.bioperl.org/DIST/BioPerl-run-1.6.1.tar.gz
Files: *
Copyright: © 1997-2006 Bioperl Team <bioperl-l@bioperl.org>
Copyright: 1997-2009 Bioperl Team <bioperl-l@bioperl.org>
Sendu Bala <bix at sendu.me.uk>
Jer-Ming Chia <giscjm at nus.edu.sg>
Rob Edwards <redwards at utmem.edu>
......@@ -30,7 +26,7 @@ Copyright: © 1997-2006 Bioperl Team <bioperl-l@bioperl.org>
Albert Vilella <avilella at gmail.com>
Tiequan Zhang <tqzhang1973 at yahoo.com>
Juguang Xiao <juguang at tll.org.sg>
License: Artistic | GPL-1+
License: Perl
Everyone can use it! We don't care if you are academic, corporate, or
government. BioPerl is licensed under the same terms as Perl itself, which
means it is dually-licensed under either the Artistic or GPL licenses. The Perl
......@@ -56,8 +52,9 @@ License: Artistic | GPL-1+
* If you are an academic and you use the software, please cite the article.
See the BioPerl publications for a list of papers which describe components in
the toolkit.
X-Comment: see http://www.bioperl.org/wiki/Licensing_BioPerl
X-Comment: Perl license
Comment: see http://www.bioperl.org/wiki/Licensing_BioPerl
License: Perl
This program is free software; you can redistribute it and/or modify
it under the terms of either:
.
......@@ -66,11 +63,11 @@ X-Comment: Perl license
version, or
.
b) the "Artistic License" which comes with Perl.
X-Comment: On Debian systems, the complete text of the Artistic License can be
Comment: On Debian systems, the complete text of the Artistic License can be
found in `/usr/share/common-licenses/Artistic', and the complete text of the
GNU General Public License can be found in `/usr/share/common-licenses/GPL'.
Files: debian/*
Copyright: © 2008 Charles Plessy <plessy@debian.org>
Copyright: 2009 Charles Plessy <plessy@debian.org>
License: Same as BioPerl itself
(see above)
......@@ -10,8 +10,6 @@
# Uncomment this to turn on verbose mode.
#export DH_VERBOSE=1
include /usr/share/quilt/quilt.make
# If set to a true value then MakeMaker's prompt function will
# always return the default without waiting for user input.
export PERL_MM_USE_DEFAULT=1
......@@ -20,7 +18,7 @@ PERL ?= /usr/bin/perl
PACKAGE = $(shell dh_listpackages)
TMP = $(CURDIR)/debian/$(PACKAGE)
build: patch build-stamp
build: build-stamp
build-stamp:
dh_testdir
# Add commands to compile the package here
......@@ -30,7 +28,7 @@ build-stamp:
# $(PERL) Build test
touch $@
clean: unpatch
clean:
dh_testdir
dh_testroot
dh_clean build-stamp install-stamp
......@@ -41,7 +39,7 @@ install: install-stamp
install-stamp: build-stamp
dh_testdir
dh_testroot
dh_clean -k
dh_prep
# Add commands to install the package into $(TMP) here
$(PERL) Build install destdir=$(TMP) create_packlist=0
# prename is the rename utility written in perl usually available as /usr/bin/rename in Debian.
......@@ -57,7 +55,6 @@ binary-indep: build install
dh_testroot
dh_installdocs
# dh_installexamples examples/*
chmod 644 debian/bioperl-run/usr/share/doc/bioperl-run/examples/pise/*
dh_installchangelogs Changes
dh_perl
dh_compress
......
version=3
#http://search.cpan.org/dist/bioperl-run/ .*/bioperl-run-v?(\d[\d_.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz|zip)$
http://www.bioperl.org/DIST/BioPerl-run-([\d\.]+)_(\d*)\.tar\.gz
http://www.bioperl.org/DIST/BioPerl-run-([\d\._]+)\.tar\.gz
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