Commit ef93d6d1 authored by Charles Plessy's avatar Charles Plessy

Disabled the tests for good, updated to latest Policy, and uploaded unpon user request.

parent c6eca961
bioperl-run (1.6.1-1) UNRELEASED; urgency=low
TODO reporducibly disable the tests…
bioperl-run (1.6.1-1) unstable; urgency=low
* New upstream release.
* debian/patches/10-wrong-path-for-interpreter.patch: removed
......@@ -14,12 +12,12 @@ bioperl-run (1.6.1-1) UNRELEASED; urgency=low
- Disabled tests as I experience failures with t/Eponine.t despite
this program is not installed.
* debian/copyright:
- Removed vanity lines about debianization.
- Removed vanity lines about debianization and debian copyright.
- Incremented years to 2009.
- Updated to latest version of the machine-readable format.
- Updated to latest experimentation of the machine-readable license summary.
* debian/control:
- Incremented Standards-Version to reflect conformance on new Policy
(no changes needed).
(dropped versionned build-dependancy on Perl).
- Removed build-dependancy on quilt (no patches anymore).
- Depend and Build-Depend on bioperl versions superior or equal to 1.6.0.
- Build-depends on, and Recommdnes libalgorithm-diff-perl, libipc-run-perl,
......@@ -28,7 +26,7 @@ bioperl-run (1.6.1-1) UNRELEASED; urgency=low
(otherwise tests fail).
- Depend on amap-align instead of amap (Closes: #541274).
-- Charles Plessy <plessy@debian.org> Sat, 11 Apr 2009 16:27:56 +0900
-- Charles Plessy <plessy@debian.org> Thu, 03 Sep 2009 11:00:03 +0900
bioperl-run (1.5.2.100-1) unstable; urgency=low
......
Source: bioperl-run
Section: science
Priority: optional
Build-Depends: debhelper (>= 7), libmodule-build-perl
Build-Depends-Indep: perl (>= 5.6.1), bioperl (>= 1.6.0), libalgorithm-diff-perl, libipc-run-perl, libio-string-perl, libxml-twig-perl,
Build-Depends: debhelper (>= 7.0.50), libmodule-build-perl
Build-Depends-Indep: perl, bioperl (>= 1.6.0), libalgorithm-diff-perl, libipc-run-perl, libio-string-perl, libxml-twig-perl,
libarray-compare-perl, libtree-dagnode-perl
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <plessy@debian.org>
Standards-Version: 3.8.1
Standards-Version: 3.8.3
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bioperl-run/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/bioperl-run/trunk/
Homepage: http://www.bioperl.org/wiki/Run_package
Package: bioperl-run
Architecture: all
Depends: perl (>= 5.6.1), ${misc:Depends}, bioperl (>= 1.6.0)
Depends: ${misc:Depends}, bioperl (>= 1.6.0)
Recommends: libalgorithm-diff-perl, libipc-run-perl, libio-string-perl, libxml-twig-perl
Suggests: amap-align, emboss, hmmer, wise, molphy, phylip, clustalw, sim4, t-coffee, blast2, exonerate
Description: Wrapper modules for BioPerl
......
Name: BioPerl-run
Maintainer: Bioperl Team <bioperl-l@bioperl.org>
Source: http://www.bioperl.org/DIST/BioPerl-run-1.6.1.tar.gz
Machine-readable license summary, see ’http://dep.debian.net/deps/dep5/’.
Name : BioPerl-run
Contact : Bioperl Team <bioperl-l@bioperl.org>
Source : http://www.bioperl.org/DIST/BioPerl-run-1.6.1.tar.gz
Copyright: 1997-2009 Bioperl Team <bioperl-l@bioperl.org>
Sendu Bala <bix at sendu.me.uk>
......@@ -27,47 +29,46 @@ Copyright: 1997-2009 Bioperl Team <bioperl-l@bioperl.org>
Tiequan Zhang <tqzhang1973 at yahoo.com>
Juguang Xiao <juguang at tll.org.sg>
License: Perl
Everyone can use it! We don't care if you are academic, corporate, or
government. BioPerl is licensed under the same terms as Perl itself, which
means it is dually-licensed under either the Artistic or GPL licenses. The Perl
Artistic License, or the GNU GPL covers all the legalese and what you can and
can't do with the source code.
.
We do appreciate:
.
* You letting us know you sell or use a product that uses BioPerl. This helps
us show people how useful our toolkit is. It also helps us if we seek funding
from a government source, to identify the utility of the code to many different
groups of users. Add your project and institution to our BioPerl Users page.
.
* If you fix bugs, please let us know about them. Because Bioperl is
dual-licensed under the GPL or Artistic licenses, you can choose the Artistic
license, which means that you are not required to submit the code fixes, but in
the spirit of making a better product we hope you'll contribute back to the
community any insight or code improvements.
.
* Please include the AUTHORS file and ascribe credit to the original BioPerl
toolkit where appropriate.
.
* If you are an academic and you use the software, please cite the article.
See the BioPerl publications for a list of papers which describe components in
the toolkit.
Comment: see http://www.bioperl.org/wiki/Licensing_BioPerl
Everyone can use it! We don't care if you are academic, corporate, or
government. BioPerl is licensed under the same terms as Perl itself, which
means it is dually-licensed under either the Artistic or GPL licenses. The Perl
Artistic License, or the GNU GPL covers all the legalese and what you can and
can't do with the source code.
We do appreciate:
* You letting us know you sell or use a product that uses BioPerl. This helps
us show people how useful our toolkit is. It also helps us if we seek funding
from a government source, to identify the utility of the code to many different
groups of users. Add your project and institution to our BioPerl Users page.
* If you fix bugs, please let us know about them. Because Bioperl is
dual-licensed under the GPL or Artistic licenses, you can choose the Artistic
license, which means that you are not required to submit the code fixes, but in
the spirit of making a better product we hope you'll contribute back to the
community any insight or code improvements.
* Please include the AUTHORS file and ascribe credit to the original BioPerl
toolkit where appropriate.
* If you are an academic and you use the software, please cite the article.
See the BioPerl publications for a list of papers which describe components in
the toolkit.
See http://www.bioperl.org/wiki/Licensing_BioPerl
License: Perl
This program is free software; you can redistribute it and/or modify
it under the terms of either:
.
a) the GNU General Public License as published by the Free Software
Foundation; either version 1, or (at your option) any later
version, or
.
b) the "Artistic License" which comes with Perl.
Comment: On Debian systems, the complete text of the Artistic License can be
found in `/usr/share/common-licenses/Artistic', and the complete text of the
GNU General Public License can be found in `/usr/share/common-licenses/GPL'.
Files: debian/*
Copyright: 2009 Charles Plessy <plessy@debian.org>
License: Same as BioPerl itself
(see above)
On Debian systems, the complete text of the Artistic License can be found in
‘/usr/share/common-licenses/Artistic’, and the complete text of the latest
version of the GNU General Public License can be found in
‘/usr/share/common-licenses/GPL’.
......@@ -2,9 +2,12 @@
build: build-stamp
build-stamp:
DEB_BUILD_OPTIONS="$$DEB_BUILD_OPTIONS nocheck" dh build
dh build
touch $@
# Test suite is failing on buildds because it does not detect correctly the absence of the Eponine program.
override_dh_auto_test:
clean:
dh $@
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment