Loading Makefile.in +48 −32 Original line number Diff line number Diff line # Makefile.in generated by automake 1.14.1 from Makefile.am. # Makefile.in generated by automake 1.16.1 from Makefile.am. # @configure_input@ # Copyright (C) 1994-2013 Free Software Foundation, Inc. # Copyright (C) 1994-2018 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -113,7 +113,17 @@ # # ############################################################################### VPATH = @srcdir@ am__is_gnu_make = test -n '$(MAKEFILE_LIST)' && test -n '$(MAKELEVEL)' am__is_gnu_make = { \ if test -z '$(MAKELEVEL)'; then \ false; \ elif test -n '$(MAKE_HOST)'; then \ true; \ elif test -n '$(MAKE_VERSION)' && test -n '$(CURDIR)'; then \ true; \ else \ false; \ fi; \ } am__make_running_with_option = \ case $${target_option-} in \ ?) ;; \ Loading Loading @@ -177,18 +187,6 @@ POST_UNINSTALL = : build_triplet = @build@ host_triplet = @host@ subdir = . DIST_COMMON = INSTALL NEWS README AUTHORS ChangeLog \ $(srcdir)/Makefile.in $(srcdir)/Makefile.am \ $(top_srcdir)/configure $(am__configure_deps) \ $(top_srcdir)/config/config.h.in $(srcdir)/control.in \ $(srcdir)/crac.spec.in COPYING config/compile \ config/config.guess config/config.sub config/depcomp \ config/install-sh config/missing config/texinfo.tex \ config/ltmain.sh $(top_srcdir)/config/compile \ $(top_srcdir)/config/config.guess \ $(top_srcdir)/config/config.sub \ $(top_srcdir)/config/install-sh $(top_srcdir)/config/ltmain.sh \ $(top_srcdir)/config/missing ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/config/m4/ltoptions.m4 \ Loading @@ -198,6 +196,8 @@ am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/configure.ac am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) DIST_COMMON = $(srcdir)/Makefile.am $(top_srcdir)/configure \ $(am__configure_deps) $(am__DIST_COMMON) am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \ configure.lineno config.status.lineno mkinstalldirs = $(install_sh) -d Loading Loading @@ -238,7 +238,7 @@ am__recursive_targets = \ $(RECURSIVE_CLEAN_TARGETS) \ $(am__extra_recursive_targets) AM_RECURSIVE_TARGETS = $(am__recursive_targets:-recursive=) TAGS CTAGS \ cscope distdir dist dist-all distcheck cscope distdir distdir-am dist dist-all distcheck am__tagged_files = $(HEADERS) $(SOURCES) $(TAGS_FILES) $(LISP) # Read a list of newline-separated strings from the standard input, # and print each of them once, without duplicates. Input order is Loading @@ -260,6 +260,16 @@ ETAGS = etags CTAGS = ctags CSCOPE = cscope DIST_SUBDIRS = $(SUBDIRS) am__DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/control.in \ $(srcdir)/crac.spec.in $(top_srcdir)/config/compile \ $(top_srcdir)/config/config.guess \ $(top_srcdir)/config/config.h.in \ $(top_srcdir)/config/config.sub \ $(top_srcdir)/config/install-sh $(top_srcdir)/config/ltmain.sh \ $(top_srcdir)/config/missing AUTHORS COPYING ChangeLog INSTALL \ NEWS README config/compile config/config.guess \ config/config.sub config/depcomp config/install-sh \ config/ltmain.sh config/missing config/texinfo.tex DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) distdir = $(PACKAGE)-$(VERSION) top_distdir = $(distdir) Loading Loading @@ -349,6 +359,7 @@ LIBTOOL = @LIBTOOL@ LIPO = @LIPO@ LN_S = @LN_S@ LTLIBOBJS = @LTLIBOBJS@ LT_SYS_LIBRARY_PATH = @LT_SYS_LIBRARY_PATH@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MKDIR_P = @MKDIR_P@ Loading Loading @@ -419,6 +430,7 @@ pdfdir = @pdfdir@ prefix = @prefix@ program_transform_name = @program_transform_name@ psdir = @psdir@ runstatedir = @runstatedir@ sbindir = @sbindir@ sharedstatedir = @sharedstatedir@ srcdir = @srcdir@ Loading Loading @@ -457,15 +469,14 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps) echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu Makefile'; \ $(am__cd) $(top_srcdir) && \ $(AUTOMAKE) --gnu Makefile .PRECIOUS: Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @case '$?' in \ *config.status*) \ echo ' $(SHELL) ./config.status'; \ $(SHELL) ./config.status;; \ *) \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__depfiles_maybe)'; \ cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__depfiles_maybe);; \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__maybe_remake_depfiles)'; \ cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__maybe_remake_depfiles);; \ esac; $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) Loading Loading @@ -611,7 +622,10 @@ distclean-tags: -rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags -rm -f cscope.out cscope.in.out cscope.po.out cscope.files distdir: $(DISTFILES) distdir: $(BUILT_SOURCES) $(MAKE) $(AM_MAKEFLAGS) distdir-am distdir-am: $(DISTFILES) $(am__remove_distdir) test -d "$(distdir)" || mkdir "$(distdir)" @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ Loading Loading @@ -676,7 +690,7 @@ distdir: $(DISTFILES) ! -type d ! -perm -444 -exec $(install_sh) -c -m a+r {} {} \; \ || chmod -R a+r "$(distdir)" dist-gzip: distdir tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz tardir=$(distdir) && $(am__tar) | eval GZIP= gzip $(GZIP_ENV) -c >$(distdir).tar.gz $(am__post_remove_distdir) dist-bzip2: distdir Loading @@ -692,17 +706,17 @@ dist-xz: distdir $(am__post_remove_distdir) dist-tarZ: distdir @echo WARNING: "Support for shar distribution archives is" \ "deprecated." >&2 @echo WARNING: "Support for distribution archives compressed with" \ "legacy program 'compress' is deprecated." >&2 @echo WARNING: "It will be removed altogether in Automake 2.0" >&2 tardir=$(distdir) && $(am__tar) | compress -c >$(distdir).tar.Z $(am__post_remove_distdir) dist-shar: distdir @echo WARNING: "Support for distribution archives compressed with" \ "legacy program 'compress' is deprecated." >&2 @echo WARNING: "Support for shar distribution archives is" \ "deprecated." >&2 @echo WARNING: "It will be removed altogether in Automake 2.0" >&2 shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz shar $(distdir) | eval GZIP= gzip $(GZIP_ENV) -c >$(distdir).shar.gz $(am__post_remove_distdir) dist-zip: distdir Loading @@ -720,7 +734,7 @@ dist dist-all: distcheck: dist case '$(DIST_ARCHIVES)' in \ *.tar.gz*) \ GZIP=$(GZIP_ENV) gzip -dc $(distdir).tar.gz | $(am__untar) ;;\ eval GZIP= gzip $(GZIP_ENV) -dc $(distdir).tar.gz | $(am__untar) ;;\ *.tar.bz2*) \ bzip2 -dc $(distdir).tar.bz2 | $(am__untar) ;;\ *.tar.lz*) \ Loading @@ -730,23 +744,23 @@ distcheck: dist *.tar.Z*) \ uncompress -c $(distdir).tar.Z | $(am__untar) ;;\ *.shar.gz*) \ GZIP=$(GZIP_ENV) gzip -dc $(distdir).shar.gz | unshar ;;\ eval GZIP= gzip $(GZIP_ENV) -dc $(distdir).shar.gz | unshar ;;\ *.zip*) \ unzip $(distdir).zip ;;\ esac chmod -R a-w $(distdir) chmod u+w $(distdir) mkdir $(distdir)/_build $(distdir)/_inst mkdir $(distdir)/_build $(distdir)/_build/sub $(distdir)/_inst chmod a-w $(distdir) test -d $(distdir)/_build || exit 0; \ dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \ && dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \ && am__cwd=`pwd` \ && $(am__cd) $(distdir)/_build \ && ../configure \ && $(am__cd) $(distdir)/_build/sub \ && ../../configure \ $(AM_DISTCHECK_CONFIGURE_FLAGS) \ $(DISTCHECK_CONFIGURE_FLAGS) \ --srcdir=.. --prefix="$$dc_install_base" \ --srcdir=../.. --prefix="$$dc_install_base" \ && $(MAKE) $(AM_MAKEFLAGS) \ && $(MAKE) $(AM_MAKEFLAGS) dvi \ && $(MAKE) $(AM_MAKEFLAGS) check \ Loading Loading @@ -927,6 +941,8 @@ uninstall-am: mostlyclean-libtool pdf pdf-am ps ps-am tags tags-am uninstall \ uninstall-am .PRECIOUS: Makefile # dist-hook: # rm -rf `find $(distdir) -type d -name .svn` Loading aclocal.m4 +92 −106 Original line number Diff line number Diff line # generated automatically by aclocal 1.14.1 -*- Autoconf -*- # generated automatically by aclocal 1.16.1 -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Copyright (C) 1996-2018 Free Software Foundation, Inc. # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -20,7 +20,7 @@ You have another version of autoconf. It may work, but is not guaranteed to. If you have problems, you may need to regenerate the build system entirely. To do so, use the procedure documented by the package, typically 'autoreconf'.])]) # Copyright (C) 2002-2013 Free Software Foundation, Inc. # Copyright (C) 2002-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -32,10 +32,10 @@ To do so, use the procedure documented by the package, typically 'autoreconf'.]) # generated from the m4 files accompanying Automake X.Y. # (This private macro should not be called outside this file.) AC_DEFUN([AM_AUTOMAKE_VERSION], [am__api_version='1.14' [am__api_version='1.16' dnl Some users find AM_AUTOMAKE_VERSION and mistake it for a way to dnl require some minimum version. Point them to the right macro. m4_if([$1], [1.14.1], [], m4_if([$1], [1.16.1], [], [AC_FATAL([Do not call $0, use AM_INIT_AUTOMAKE([$1]).])])dnl ]) Loading @@ -51,14 +51,14 @@ m4_define([_AM_AUTOCONF_VERSION], []) # Call AM_AUTOMAKE_VERSION and AM_AUTOMAKE_VERSION so they can be traced. # This function is AC_REQUIREd by AM_INIT_AUTOMAKE. AC_DEFUN([AM_SET_CURRENT_AUTOMAKE_VERSION], [AM_AUTOMAKE_VERSION([1.14.1])dnl [AM_AUTOMAKE_VERSION([1.16.1])dnl m4_ifndef([AC_AUTOCONF_VERSION], [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl _AM_AUTOCONF_VERSION(m4_defn([AC_AUTOCONF_VERSION]))]) # AM_AUX_DIR_EXPAND -*- Autoconf -*- # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -110,7 +110,7 @@ am_aux_dir=`cd "$ac_aux_dir" && pwd` # AM_CONDITIONAL -*- Autoconf -*- # Copyright (C) 1997-2013 Free Software Foundation, Inc. # Copyright (C) 1997-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -141,7 +141,7 @@ AC_CONFIG_COMMANDS_PRE( Usually this means the macro was only invoked conditionally.]]) fi])]) # Copyright (C) 1999-2013 Free Software Foundation, Inc. # Copyright (C) 1999-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -332,13 +332,12 @@ _AM_SUBST_NOTMAKE([am__nodep])dnl # Generate code to set up dependency tracking. -*- Autoconf -*- # Copyright (C) 1999-2013 Free Software Foundation, Inc. # Copyright (C) 1999-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # _AM_OUTPUT_DEPENDENCY_COMMANDS # ------------------------------ AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS], Loading @@ -346,49 +345,41 @@ AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS], # Older Autoconf quotes --file arguments for eval, but not when files # are listed without --file. Let's play safe and only enable the eval # if we detect the quoting. case $CONFIG_FILES in *\'*) eval set x "$CONFIG_FILES" ;; *) set x $CONFIG_FILES ;; esac # TODO: see whether this extra hack can be removed once we start # requiring Autoconf 2.70 or later. AS_CASE([$CONFIG_FILES], [*\'*], [eval set x "$CONFIG_FILES"], [*], [set x $CONFIG_FILES]) shift for mf # Used to flag and report bootstrapping failures. am_rc=0 for am_mf do # Strip MF so we end up with the name of the file. mf=`echo "$mf" | sed -e 's/:.*$//'` # Check whether this is an Automake generated Makefile or not. # We used to match only the files named 'Makefile.in', but # some people rename them; so instead we look at the file content. # Grep'ing the first line is not enough: some people post-process # each Makefile.in and add a new line on top of each file to say so. # Grep'ing the whole file is not good either: AIX grep has a line am_mf=`AS_ECHO(["$am_mf"]) | sed -e 's/:.*$//'` # Check whether this is an Automake generated Makefile which includes # dependency-tracking related rules and includes. # Grep'ing the whole file directly is not great: AIX grep has a line # limit of 2048, but all sed's we know have understand at least 4000. if sed -n 's,^#.*generated by automake.*,X,p' "$mf" | grep X >/dev/null 2>&1; then dirpart=`AS_DIRNAME("$mf")` else continue fi # Extract the definition of DEPDIR, am__include, and am__quote # from the Makefile without running 'make'. 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Try re-running configure with the '--disable-dependency-tracking' option to at least be able to build the package (albeit without support for automatic dependency tracking).]) fi AS_UNSET([am_dirpart]) AS_UNSET([am_filepart]) AS_UNSET([am_mf]) AS_UNSET([am_rc]) rm -f conftest-deps.mk } ])# _AM_OUTPUT_DEPENDENCY_COMMANDS Loading @@ -397,18 +388,17 @@ AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS], # ----------------------------- # This macro should only be invoked once -- use via AC_REQUIRE. # # This code is only required when automatic dependency tracking # is enabled. FIXME. This creates each '.P' file that we will # need in order to bootstrap the dependency handling code. # This code is only required when automatic dependency tracking is enabled. # This creates each '.Po' and '.Plo' makefile fragment that we'll need in # order to bootstrap the dependency handling code. AC_DEFUN([AM_OUTPUT_DEPENDENCY_COMMANDS], [AC_CONFIG_COMMANDS([depfiles], [test x"$AMDEP_TRUE" != x"" || _AM_OUTPUT_DEPENDENCY_COMMANDS], [AMDEP_TRUE="$AMDEP_TRUE" ac_aux_dir="$ac_aux_dir"]) ]) [AMDEP_TRUE="$AMDEP_TRUE" MAKE="${MAKE-make}"])]) # Do all the work for Automake. -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Copyright (C) 1996-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -495,11 +485,11 @@ AC_REQUIRE([AM_PROG_INSTALL_STRIP])dnl AC_REQUIRE([AC_PROG_MKDIR_P])dnl # For better backward compatibility. To be removed once Automake 1.9.x # dies out for good. For more background, see: # <http://lists.gnu.org/archive/html/automake/2012-07/msg00001.html> # <http://lists.gnu.org/archive/html/automake/2012-07/msg00014.html> # <https://lists.gnu.org/archive/html/automake/2012-07/msg00001.html> # <https://lists.gnu.org/archive/html/automake/2012-07/msg00014.html> AC_SUBST([mkdir_p], ['$(MKDIR_P)']) # We need awk for the "check" target. The system "awk" is bad on # some platforms. # We need awk for the "check" target (and possibly the TAP driver). The # system "awk" is bad on some platforms. AC_REQUIRE([AC_PROG_AWK])dnl AC_REQUIRE([AC_PROG_MAKE_SET])dnl AC_REQUIRE([AM_SET_LEADING_DOT])dnl Loading Loading @@ -563,7 +553,7 @@ END Aborting the configuration process, to ensure you take notice of the issue. You can download and install GNU coreutils to get an 'rm' implementation that behaves properly: <http://www.gnu.org/software/coreutils/>. that behaves properly: <https://www.gnu.org/software/coreutils/>. If you want to complete the configuration process using your problematic 'rm' anyway, export the environment variable ACCEPT_INFERIOR_RM_PROGRAM Loading @@ -573,6 +563,9 @@ END AC_MSG_ERROR([Your 'rm' program is bad, sorry.]) fi fi dnl The trailing newline in this macro's definition is deliberate, for dnl backward compatibility and to allow trailing 'dnl'-style comments dnl after the AM_INIT_AUTOMAKE invocation. See automake bug#16841. ]) dnl Hook into '_AC_COMPILER_EXEEXT' early to learn its expansion. Do not Loading Loading @@ -602,7 +595,7 @@ for _am_header in $config_headers :; do done echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_count]) # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -613,7 +606,7 @@ echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_co # Define $install_sh. AC_DEFUN([AM_PROG_INSTALL_SH], [AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl if test x"${install_sh}" != xset; then if test x"${install_sh+set}" != xset; then case $am_aux_dir in *\ * | *\ *) install_sh="\${SHELL} '$am_aux_dir/install-sh'" ;; Loading @@ -623,7 +616,7 @@ if test x"${install_sh}" != xset; then fi AC_SUBST([install_sh])]) # Copyright (C) 2003-2013 Free Software Foundation, Inc. # Copyright (C) 2003-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -644,7 +637,7 @@ AC_SUBST([am__leading_dot])]) # Check to see how 'make' treats includes. -*- Autoconf -*- # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -652,49 +645,42 @@ AC_SUBST([am__leading_dot])]) # AM_MAKE_INCLUDE() # ----------------- # Check to see how make treats includes. # Check whether make has an 'include' directive that can support all # the idioms we need for our automatic dependency tracking code. AC_DEFUN([AM_MAKE_INCLUDE], [am_make=${MAKE-make} cat > confinc << 'END' [AC_MSG_CHECKING([whether ${MAKE-make} supports the include directive]) cat > confinc.mk << 'END' am__doit: @echo this is the am__doit target @echo this is the am__doit target >confinc.out .PHONY: am__doit END # If we don't find an include directive, just comment out the code. AC_MSG_CHECKING([for style of include used by $am_make]) am__include="#" am__quote= _am_result=none # First try GNU make style include. echo "include confinc" > confmf # Ignore all kinds of additional output from 'make'. case `$am_make -s -f confmf 2> /dev/null` in #( *the\ am__doit\ target*) am__include=include am__quote= _am_result=GNU ;; esac # Now try BSD make style include. if test "$am__include" = "#"; then echo '.include "confinc"' > confmf case `$am_make -s -f confmf 2> /dev/null` in #( *the\ am__doit\ target*) am__include=.include am__quote="\"" _am_result=BSD ;; esac # BSD make does it like this. echo '.include "confinc.mk" # ignored' > confmf.BSD # Other make implementations (GNU, Solaris 10, AIX) do it like this. echo 'include confinc.mk # ignored' > confmf.GNU _am_result=no for s in GNU BSD; do AM_RUN_LOG([${MAKE-make} -f confmf.$s && cat confinc.out]) AS_CASE([$?:`cat confinc.out 2>/dev/null`], ['0:this is the am__doit target'], [AS_CASE([$s], [BSD], [am__include='.include' am__quote='"'], [am__include='include' am__quote=''])]) if test "$am__include" != "#"; then _am_result="yes ($s style)" break fi AC_SUBST([am__include]) AC_SUBST([am__quote]) AC_MSG_RESULT([$_am_result]) rm -f confinc confmf ]) done rm -f confinc.* confmf.* AC_MSG_RESULT([${_am_result}]) AC_SUBST([am__include])]) AC_SUBST([am__quote])]) # Fake the existence of programs that GNU maintainers use. -*- Autoconf -*- # Copyright (C) 1997-2013 Free Software Foundation, Inc. # Copyright (C) 1997-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -733,7 +719,7 @@ fi # Helper functions for option handling. -*- Autoconf -*- # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -762,7 +748,7 @@ AC_DEFUN([_AM_SET_OPTIONS], AC_DEFUN([_AM_IF_OPTION], [m4_ifset(_AM_MANGLE_OPTION([$1]), [$2], [$3])]) # Copyright (C) 1999-2013 Free Software Foundation, Inc. # Copyright (C) 1999-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -809,7 +795,7 @@ AC_LANG_POP([C])]) # For backward compatibility. AC_DEFUN_ONCE([AM_PROG_CC_C_O], [AC_REQUIRE([AC_PROG_CC])]) # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -828,7 +814,7 @@ AC_DEFUN([AM_RUN_LOG], # Check to make sure that the build environment is sane. -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Copyright (C) 1996-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -909,7 +895,7 @@ AC_CONFIG_COMMANDS_PRE( rm -f conftest.file ]) # Copyright (C) 2009-2013 Free Software Foundation, Inc. # Copyright (C) 2009-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -969,7 +955,7 @@ AC_SUBST([AM_BACKSLASH])dnl _AM_SUBST_NOTMAKE([AM_BACKSLASH])dnl ]) # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -997,7 +983,7 @@ fi INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s" AC_SUBST([INSTALL_STRIP_PROGRAM])]) # Copyright (C) 2006-2013 Free Software Foundation, Inc. # Copyright (C) 2006-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -1016,7 +1002,7 @@ AC_DEFUN([AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE($@)]) # Check how to create a tarball. -*- Autoconf -*- # Copyright (C) 2004-2013 Free Software Foundation, Inc. # Copyright (C) 2004-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading configure +2003 −1443 File changed.Preview size limit exceeded, changes collapsed. Show changes configure.ac +6 −4 Original line number Diff line number Diff line Loading @@ -56,7 +56,7 @@ dnl Process this file with autoconf to produce a configure script. AC_PREREQ([2.64]) m4_define([V_MAJOR], [2]) m4_define([V_MINOR], [5]) m4_define([V_MICRO], [0]) m4_define([V_MICRO], [2]) AC_INIT( [crac], Loading Loading @@ -153,7 +153,8 @@ AC_PROG_LN_S AC_SUBST([VERSION]) dnl Disable shared library construction by default (must appear before LT_INIT) AC_DISABLE_SHARED AC_ENABLE_SHARED AC_DISABLE_STATIC LT_INIT LT_PATH_LD Loading Loading @@ -307,7 +308,7 @@ AM_CONDITIONAL([INCLUDED_PROGRESSBAR], [test "x$with_included_ProgressBar" == "x AC_CHECK_LIB([z], [gzread], , [AC_MSG_ERROR([zlib not found, see http://www.zlib.net])]) AC_CHECK_LIB([hts], [hts_open], , AC_CHECK_LIB([hts], [hts_hopen], , [AC_MSG_ERROR([htslib not found, see http://www.htslib.org/])]) GK_OK=1 Loading Loading @@ -359,7 +360,8 @@ AS_IF([test "x$enable_shared" == "xyes" ], [AS_VAR_APPEND([ac_configure_args], [" --enable-shared"])], [AS_VAR_APPEND([ac_configure_args], [" --disable-shared"])]) AS_IF([test "x$enable_static" == "xyes" ], [AS_VAR_APPEND([ac_configure_args], [" --enable-static"])], [LDFLAGS="$LDFLAGS -all-static" AS_VAR_APPEND([ac_configure_args], [" --enable-static"])], [AS_VAR_APPEND([ac_configure_args], [" --disable-static"])]) dnl Forward FLAGS to libGkArrays/libProgressBar configure scripts if needed Loading man/Makefile.in +25 −9 Original line number Diff line number Diff line # Makefile.in generated by automake 1.14.1 from Makefile.am. # Makefile.in generated by automake 1.16.1 from Makefile.am. # @configure_input@ # Copyright (C) 1994-2013 Free Software Foundation, Inc. # Copyright (C) 1994-2018 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -113,7 +113,17 @@ # # ############################################################################### VPATH = @srcdir@ am__is_gnu_make = test -n '$(MAKEFILE_LIST)' && test -n '$(MAKELEVEL)' am__is_gnu_make = { \ if test -z '$(MAKELEVEL)'; then \ false; \ elif test -n '$(MAKE_HOST)'; then \ true; \ elif test -n '$(MAKE_VERSION)' && test -n '$(CURDIR)'; then \ true; \ else \ false; \ fi; \ } am__make_running_with_option = \ case $${target_option-} in \ ?) ;; \ Loading Loading @@ -177,8 +187,6 @@ POST_UNINSTALL = : build_triplet = @build@ host_triplet = @host@ subdir = man DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/Makefile.am \ $(srcdir)/crac.1.in ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/config/m4/ltoptions.m4 \ Loading @@ -188,6 +196,7 @@ am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/configure.ac am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) DIST_COMMON = $(srcdir)/Makefile.am $(am__DIST_COMMON) mkinstalldirs = $(install_sh) -d CONFIG_HEADER = $(top_builddir)/config/config.h CONFIG_CLEAN_FILES = crac.1 Loading Loading @@ -243,6 +252,7 @@ am__installdirs = "$(DESTDIR)$(man1dir)" NROFF = nroff MANS = $(man_MANS) am__tagged_files = $(HEADERS) $(SOURCES) $(TAGS_FILES) $(LISP) am__DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/crac.1.in DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) ACLOCAL = @ACLOCAL@ ALLOCA = @ALLOCA@ Loading Loading @@ -291,6 +301,7 @@ LIBTOOL = @LIBTOOL@ LIPO = @LIPO@ LN_S = @LN_S@ LTLIBOBJS = @LTLIBOBJS@ LT_SYS_LIBRARY_PATH = @LT_SYS_LIBRARY_PATH@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MKDIR_P = @MKDIR_P@ Loading Loading @@ -361,6 +372,7 @@ pdfdir = @pdfdir@ prefix = @prefix@ program_transform_name = @program_transform_name@ psdir = @psdir@ runstatedir = @runstatedir@ sbindir = @sbindir@ sharedstatedir = @sharedstatedir@ srcdir = @srcdir@ Loading Loading @@ -396,14 +408,13 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps) echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu man/Makefile'; \ $(am__cd) $(top_srcdir) && \ $(AUTOMAKE) --gnu man/Makefile .PRECIOUS: Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @case '$?' in \ *config.status*) \ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \ *) \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__maybe_remake_depfiles)'; \ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__maybe_remake_depfiles);; \ esac; $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) Loading Loading @@ -472,7 +483,10 @@ ctags CTAGS: cscope cscopelist: distdir: $(DISTFILES) distdir: $(BUILT_SOURCES) $(MAKE) $(AM_MAKEFLAGS) distdir-am distdir-am: $(DISTFILES) @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ list='$(DISTFILES)'; \ Loading Loading @@ -626,6 +640,8 @@ uninstall-man: uninstall-man1 ps ps-am tags-am uninstall uninstall-am uninstall-man \ uninstall-man1 .PRECIOUS: Makefile # Tell versions [3.59,3.63) of GNU make to not export all variables. # Otherwise a system limit (for SysV at least) may be exceeded. Loading Loading
Makefile.in +48 −32 Original line number Diff line number Diff line # Makefile.in generated by automake 1.14.1 from Makefile.am. # Makefile.in generated by automake 1.16.1 from Makefile.am. # @configure_input@ # Copyright (C) 1994-2013 Free Software Foundation, Inc. # Copyright (C) 1994-2018 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -113,7 +113,17 @@ # # ############################################################################### VPATH = @srcdir@ am__is_gnu_make = test -n '$(MAKEFILE_LIST)' && test -n '$(MAKELEVEL)' am__is_gnu_make = { \ if test -z '$(MAKELEVEL)'; then \ false; \ elif test -n '$(MAKE_HOST)'; then \ true; \ elif test -n '$(MAKE_VERSION)' && test -n '$(CURDIR)'; then \ true; \ else \ false; \ fi; \ } am__make_running_with_option = \ case $${target_option-} in \ ?) ;; \ Loading Loading @@ -177,18 +187,6 @@ POST_UNINSTALL = : build_triplet = @build@ host_triplet = @host@ subdir = . DIST_COMMON = INSTALL NEWS README AUTHORS ChangeLog \ $(srcdir)/Makefile.in $(srcdir)/Makefile.am \ $(top_srcdir)/configure $(am__configure_deps) \ $(top_srcdir)/config/config.h.in $(srcdir)/control.in \ $(srcdir)/crac.spec.in COPYING config/compile \ config/config.guess config/config.sub config/depcomp \ config/install-sh config/missing config/texinfo.tex \ config/ltmain.sh $(top_srcdir)/config/compile \ $(top_srcdir)/config/config.guess \ $(top_srcdir)/config/config.sub \ $(top_srcdir)/config/install-sh $(top_srcdir)/config/ltmain.sh \ $(top_srcdir)/config/missing ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/config/m4/ltoptions.m4 \ Loading @@ -198,6 +196,8 @@ am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/configure.ac am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) DIST_COMMON = $(srcdir)/Makefile.am $(top_srcdir)/configure \ $(am__configure_deps) $(am__DIST_COMMON) am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \ configure.lineno config.status.lineno mkinstalldirs = $(install_sh) -d Loading Loading @@ -238,7 +238,7 @@ am__recursive_targets = \ $(RECURSIVE_CLEAN_TARGETS) \ $(am__extra_recursive_targets) AM_RECURSIVE_TARGETS = $(am__recursive_targets:-recursive=) TAGS CTAGS \ cscope distdir dist dist-all distcheck cscope distdir distdir-am dist dist-all distcheck am__tagged_files = $(HEADERS) $(SOURCES) $(TAGS_FILES) $(LISP) # Read a list of newline-separated strings from the standard input, # and print each of them once, without duplicates. Input order is Loading @@ -260,6 +260,16 @@ ETAGS = etags CTAGS = ctags CSCOPE = cscope DIST_SUBDIRS = $(SUBDIRS) am__DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/control.in \ $(srcdir)/crac.spec.in $(top_srcdir)/config/compile \ $(top_srcdir)/config/config.guess \ $(top_srcdir)/config/config.h.in \ $(top_srcdir)/config/config.sub \ $(top_srcdir)/config/install-sh $(top_srcdir)/config/ltmain.sh \ $(top_srcdir)/config/missing AUTHORS COPYING ChangeLog INSTALL \ NEWS README config/compile config/config.guess \ config/config.sub config/depcomp config/install-sh \ config/ltmain.sh config/missing config/texinfo.tex DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) distdir = $(PACKAGE)-$(VERSION) top_distdir = $(distdir) Loading Loading @@ -349,6 +359,7 @@ LIBTOOL = @LIBTOOL@ LIPO = @LIPO@ LN_S = @LN_S@ LTLIBOBJS = @LTLIBOBJS@ LT_SYS_LIBRARY_PATH = @LT_SYS_LIBRARY_PATH@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MKDIR_P = @MKDIR_P@ Loading Loading @@ -419,6 +430,7 @@ pdfdir = @pdfdir@ prefix = @prefix@ program_transform_name = @program_transform_name@ psdir = @psdir@ runstatedir = @runstatedir@ sbindir = @sbindir@ sharedstatedir = @sharedstatedir@ srcdir = @srcdir@ Loading Loading @@ -457,15 +469,14 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps) echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu Makefile'; \ $(am__cd) $(top_srcdir) && \ $(AUTOMAKE) --gnu Makefile .PRECIOUS: Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @case '$?' in \ *config.status*) \ echo ' $(SHELL) ./config.status'; \ $(SHELL) ./config.status;; \ *) \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__depfiles_maybe)'; \ cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__depfiles_maybe);; \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__maybe_remake_depfiles)'; \ cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__maybe_remake_depfiles);; \ esac; $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) Loading Loading @@ -611,7 +622,10 @@ distclean-tags: -rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags -rm -f cscope.out cscope.in.out cscope.po.out cscope.files distdir: $(DISTFILES) distdir: $(BUILT_SOURCES) $(MAKE) $(AM_MAKEFLAGS) distdir-am distdir-am: $(DISTFILES) $(am__remove_distdir) test -d "$(distdir)" || mkdir "$(distdir)" @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ Loading Loading @@ -676,7 +690,7 @@ distdir: $(DISTFILES) ! -type d ! -perm -444 -exec $(install_sh) -c -m a+r {} {} \; \ || chmod -R a+r "$(distdir)" dist-gzip: distdir tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz tardir=$(distdir) && $(am__tar) | eval GZIP= gzip $(GZIP_ENV) -c >$(distdir).tar.gz $(am__post_remove_distdir) dist-bzip2: distdir Loading @@ -692,17 +706,17 @@ dist-xz: distdir $(am__post_remove_distdir) dist-tarZ: distdir @echo WARNING: "Support for shar distribution archives is" \ "deprecated." >&2 @echo WARNING: "Support for distribution archives compressed with" \ "legacy program 'compress' is deprecated." >&2 @echo WARNING: "It will be removed altogether in Automake 2.0" >&2 tardir=$(distdir) && $(am__tar) | compress -c >$(distdir).tar.Z $(am__post_remove_distdir) dist-shar: distdir @echo WARNING: "Support for distribution archives compressed with" \ "legacy program 'compress' is deprecated." >&2 @echo WARNING: "Support for shar distribution archives is" \ "deprecated." >&2 @echo WARNING: "It will be removed altogether in Automake 2.0" >&2 shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz shar $(distdir) | eval GZIP= gzip $(GZIP_ENV) -c >$(distdir).shar.gz $(am__post_remove_distdir) dist-zip: distdir Loading @@ -720,7 +734,7 @@ dist dist-all: distcheck: dist case '$(DIST_ARCHIVES)' in \ *.tar.gz*) \ GZIP=$(GZIP_ENV) gzip -dc $(distdir).tar.gz | $(am__untar) ;;\ eval GZIP= gzip $(GZIP_ENV) -dc $(distdir).tar.gz | $(am__untar) ;;\ *.tar.bz2*) \ bzip2 -dc $(distdir).tar.bz2 | $(am__untar) ;;\ *.tar.lz*) \ Loading @@ -730,23 +744,23 @@ distcheck: dist *.tar.Z*) \ uncompress -c $(distdir).tar.Z | $(am__untar) ;;\ *.shar.gz*) \ GZIP=$(GZIP_ENV) gzip -dc $(distdir).shar.gz | unshar ;;\ eval GZIP= gzip $(GZIP_ENV) -dc $(distdir).shar.gz | unshar ;;\ *.zip*) \ unzip $(distdir).zip ;;\ esac chmod -R a-w $(distdir) chmod u+w $(distdir) mkdir $(distdir)/_build $(distdir)/_inst mkdir $(distdir)/_build $(distdir)/_build/sub $(distdir)/_inst chmod a-w $(distdir) test -d $(distdir)/_build || exit 0; \ dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \ && dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \ && am__cwd=`pwd` \ && $(am__cd) $(distdir)/_build \ && ../configure \ && $(am__cd) $(distdir)/_build/sub \ && ../../configure \ $(AM_DISTCHECK_CONFIGURE_FLAGS) \ $(DISTCHECK_CONFIGURE_FLAGS) \ --srcdir=.. --prefix="$$dc_install_base" \ --srcdir=../.. --prefix="$$dc_install_base" \ && $(MAKE) $(AM_MAKEFLAGS) \ && $(MAKE) $(AM_MAKEFLAGS) dvi \ && $(MAKE) $(AM_MAKEFLAGS) check \ Loading Loading @@ -927,6 +941,8 @@ uninstall-am: mostlyclean-libtool pdf pdf-am ps ps-am tags tags-am uninstall \ uninstall-am .PRECIOUS: Makefile # dist-hook: # rm -rf `find $(distdir) -type d -name .svn` Loading
aclocal.m4 +92 −106 Original line number Diff line number Diff line # generated automatically by aclocal 1.14.1 -*- Autoconf -*- # generated automatically by aclocal 1.16.1 -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Copyright (C) 1996-2018 Free Software Foundation, Inc. # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -20,7 +20,7 @@ You have another version of autoconf. It may work, but is not guaranteed to. If you have problems, you may need to regenerate the build system entirely. To do so, use the procedure documented by the package, typically 'autoreconf'.])]) # Copyright (C) 2002-2013 Free Software Foundation, Inc. # Copyright (C) 2002-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -32,10 +32,10 @@ To do so, use the procedure documented by the package, typically 'autoreconf'.]) # generated from the m4 files accompanying Automake X.Y. # (This private macro should not be called outside this file.) AC_DEFUN([AM_AUTOMAKE_VERSION], [am__api_version='1.14' [am__api_version='1.16' dnl Some users find AM_AUTOMAKE_VERSION and mistake it for a way to dnl require some minimum version. Point them to the right macro. m4_if([$1], [1.14.1], [], m4_if([$1], [1.16.1], [], [AC_FATAL([Do not call $0, use AM_INIT_AUTOMAKE([$1]).])])dnl ]) Loading @@ -51,14 +51,14 @@ m4_define([_AM_AUTOCONF_VERSION], []) # Call AM_AUTOMAKE_VERSION and AM_AUTOMAKE_VERSION so they can be traced. # This function is AC_REQUIREd by AM_INIT_AUTOMAKE. AC_DEFUN([AM_SET_CURRENT_AUTOMAKE_VERSION], [AM_AUTOMAKE_VERSION([1.14.1])dnl [AM_AUTOMAKE_VERSION([1.16.1])dnl m4_ifndef([AC_AUTOCONF_VERSION], [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl _AM_AUTOCONF_VERSION(m4_defn([AC_AUTOCONF_VERSION]))]) # AM_AUX_DIR_EXPAND -*- Autoconf -*- # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -110,7 +110,7 @@ am_aux_dir=`cd "$ac_aux_dir" && pwd` # AM_CONDITIONAL -*- Autoconf -*- # Copyright (C) 1997-2013 Free Software Foundation, Inc. # Copyright (C) 1997-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -141,7 +141,7 @@ AC_CONFIG_COMMANDS_PRE( Usually this means the macro was only invoked conditionally.]]) fi])]) # Copyright (C) 1999-2013 Free Software Foundation, Inc. # Copyright (C) 1999-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -332,13 +332,12 @@ _AM_SUBST_NOTMAKE([am__nodep])dnl # Generate code to set up dependency tracking. -*- Autoconf -*- # Copyright (C) 1999-2013 Free Software Foundation, Inc. # Copyright (C) 1999-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # _AM_OUTPUT_DEPENDENCY_COMMANDS # ------------------------------ AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS], Loading @@ -346,49 +345,41 @@ AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS], # Older Autoconf quotes --file arguments for eval, but not when files # are listed without --file. Let's play safe and only enable the eval # if we detect the quoting. case $CONFIG_FILES in *\'*) eval set x "$CONFIG_FILES" ;; *) set x $CONFIG_FILES ;; esac # TODO: see whether this extra hack can be removed once we start # requiring Autoconf 2.70 or later. AS_CASE([$CONFIG_FILES], [*\'*], [eval set x "$CONFIG_FILES"], [*], [set x $CONFIG_FILES]) shift for mf # Used to flag and report bootstrapping failures. am_rc=0 for am_mf do # Strip MF so we end up with the name of the file. mf=`echo "$mf" | sed -e 's/:.*$//'` # Check whether this is an Automake generated Makefile or not. # We used to match only the files named 'Makefile.in', but # some people rename them; so instead we look at the file content. # Grep'ing the first line is not enough: some people post-process # each Makefile.in and add a new line on top of each file to say so. # Grep'ing the whole file is not good either: AIX grep has a line am_mf=`AS_ECHO(["$am_mf"]) | sed -e 's/:.*$//'` # Check whether this is an Automake generated Makefile which includes # dependency-tracking related rules and includes. # Grep'ing the whole file directly is not great: AIX grep has a line # limit of 2048, but all sed's we know have understand at least 4000. if sed -n 's,^#.*generated by automake.*,X,p' "$mf" | grep X >/dev/null 2>&1; then dirpart=`AS_DIRNAME("$mf")` else continue fi # Extract the definition of DEPDIR, am__include, and am__quote # from the Makefile without running 'make'. 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We invoke sed twice because it is the # simplest approach to changing $(DEPDIR) to its actual value in the # expansion. for file in `sed -n " s/^$am__include $am__quote\(.*(DEPDIR).*\)$am__quote"'$/\1/p' <"$mf" | \ sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g'`; do # Make sure the directory exists. test -f "$dirpart/$file" && continue fdir=`AS_DIRNAME(["$file"])` AS_MKDIR_P([$dirpart/$fdir]) # echo "creating $dirpart/$file" echo '# dummy' > "$dirpart/$file" done sed -n 's,^am--depfiles:.*,X,p' "$am_mf" | grep X >/dev/null 2>&1 \ || continue am_dirpart=`AS_DIRNAME(["$am_mf"])` am_filepart=`AS_BASENAME(["$am_mf"])` AM_RUN_LOG([cd "$am_dirpart" \ && sed -e '/# am--include-marker/d' "$am_filepart" \ | $MAKE -f - am--depfiles]) || am_rc=$? done if test $am_rc -ne 0; then AC_MSG_FAILURE([Something went wrong bootstrapping makefile fragments for automatic dependency tracking. Try re-running configure with the '--disable-dependency-tracking' option to at least be able to build the package (albeit without support for automatic dependency tracking).]) fi AS_UNSET([am_dirpart]) AS_UNSET([am_filepart]) AS_UNSET([am_mf]) AS_UNSET([am_rc]) rm -f conftest-deps.mk } ])# _AM_OUTPUT_DEPENDENCY_COMMANDS Loading @@ -397,18 +388,17 @@ AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS], # ----------------------------- # This macro should only be invoked once -- use via AC_REQUIRE. # # This code is only required when automatic dependency tracking # is enabled. FIXME. This creates each '.P' file that we will # need in order to bootstrap the dependency handling code. # This code is only required when automatic dependency tracking is enabled. # This creates each '.Po' and '.Plo' makefile fragment that we'll need in # order to bootstrap the dependency handling code. AC_DEFUN([AM_OUTPUT_DEPENDENCY_COMMANDS], [AC_CONFIG_COMMANDS([depfiles], [test x"$AMDEP_TRUE" != x"" || _AM_OUTPUT_DEPENDENCY_COMMANDS], [AMDEP_TRUE="$AMDEP_TRUE" ac_aux_dir="$ac_aux_dir"]) ]) [AMDEP_TRUE="$AMDEP_TRUE" MAKE="${MAKE-make}"])]) # Do all the work for Automake. -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Copyright (C) 1996-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -495,11 +485,11 @@ AC_REQUIRE([AM_PROG_INSTALL_STRIP])dnl AC_REQUIRE([AC_PROG_MKDIR_P])dnl # For better backward compatibility. To be removed once Automake 1.9.x # dies out for good. For more background, see: # <http://lists.gnu.org/archive/html/automake/2012-07/msg00001.html> # <http://lists.gnu.org/archive/html/automake/2012-07/msg00014.html> # <https://lists.gnu.org/archive/html/automake/2012-07/msg00001.html> # <https://lists.gnu.org/archive/html/automake/2012-07/msg00014.html> AC_SUBST([mkdir_p], ['$(MKDIR_P)']) # We need awk for the "check" target. The system "awk" is bad on # some platforms. # We need awk for the "check" target (and possibly the TAP driver). The # system "awk" is bad on some platforms. AC_REQUIRE([AC_PROG_AWK])dnl AC_REQUIRE([AC_PROG_MAKE_SET])dnl AC_REQUIRE([AM_SET_LEADING_DOT])dnl Loading Loading @@ -563,7 +553,7 @@ END Aborting the configuration process, to ensure you take notice of the issue. You can download and install GNU coreutils to get an 'rm' implementation that behaves properly: <http://www.gnu.org/software/coreutils/>. that behaves properly: <https://www.gnu.org/software/coreutils/>. If you want to complete the configuration process using your problematic 'rm' anyway, export the environment variable ACCEPT_INFERIOR_RM_PROGRAM Loading @@ -573,6 +563,9 @@ END AC_MSG_ERROR([Your 'rm' program is bad, sorry.]) fi fi dnl The trailing newline in this macro's definition is deliberate, for dnl backward compatibility and to allow trailing 'dnl'-style comments dnl after the AM_INIT_AUTOMAKE invocation. See automake bug#16841. ]) dnl Hook into '_AC_COMPILER_EXEEXT' early to learn its expansion. Do not Loading Loading @@ -602,7 +595,7 @@ for _am_header in $config_headers :; do done echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_count]) # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -613,7 +606,7 @@ echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_co # Define $install_sh. AC_DEFUN([AM_PROG_INSTALL_SH], [AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl if test x"${install_sh}" != xset; then if test x"${install_sh+set}" != xset; then case $am_aux_dir in *\ * | *\ *) install_sh="\${SHELL} '$am_aux_dir/install-sh'" ;; Loading @@ -623,7 +616,7 @@ if test x"${install_sh}" != xset; then fi AC_SUBST([install_sh])]) # Copyright (C) 2003-2013 Free Software Foundation, Inc. # Copyright (C) 2003-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -644,7 +637,7 @@ AC_SUBST([am__leading_dot])]) # Check to see how 'make' treats includes. -*- Autoconf -*- # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -652,49 +645,42 @@ AC_SUBST([am__leading_dot])]) # AM_MAKE_INCLUDE() # ----------------- # Check to see how make treats includes. # Check whether make has an 'include' directive that can support all # the idioms we need for our automatic dependency tracking code. AC_DEFUN([AM_MAKE_INCLUDE], [am_make=${MAKE-make} cat > confinc << 'END' [AC_MSG_CHECKING([whether ${MAKE-make} supports the include directive]) cat > confinc.mk << 'END' am__doit: @echo this is the am__doit target @echo this is the am__doit target >confinc.out .PHONY: am__doit END # If we don't find an include directive, just comment out the code. AC_MSG_CHECKING([for style of include used by $am_make]) am__include="#" am__quote= _am_result=none # First try GNU make style include. echo "include confinc" > confmf # Ignore all kinds of additional output from 'make'. case `$am_make -s -f confmf 2> /dev/null` in #( *the\ am__doit\ target*) am__include=include am__quote= _am_result=GNU ;; esac # Now try BSD make style include. if test "$am__include" = "#"; then echo '.include "confinc"' > confmf case `$am_make -s -f confmf 2> /dev/null` in #( *the\ am__doit\ target*) am__include=.include am__quote="\"" _am_result=BSD ;; esac # BSD make does it like this. echo '.include "confinc.mk" # ignored' > confmf.BSD # Other make implementations (GNU, Solaris 10, AIX) do it like this. echo 'include confinc.mk # ignored' > confmf.GNU _am_result=no for s in GNU BSD; do AM_RUN_LOG([${MAKE-make} -f confmf.$s && cat confinc.out]) AS_CASE([$?:`cat confinc.out 2>/dev/null`], ['0:this is the am__doit target'], [AS_CASE([$s], [BSD], [am__include='.include' am__quote='"'], [am__include='include' am__quote=''])]) if test "$am__include" != "#"; then _am_result="yes ($s style)" break fi AC_SUBST([am__include]) AC_SUBST([am__quote]) AC_MSG_RESULT([$_am_result]) rm -f confinc confmf ]) done rm -f confinc.* confmf.* AC_MSG_RESULT([${_am_result}]) AC_SUBST([am__include])]) AC_SUBST([am__quote])]) # Fake the existence of programs that GNU maintainers use. -*- Autoconf -*- # Copyright (C) 1997-2013 Free Software Foundation, Inc. # Copyright (C) 1997-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -733,7 +719,7 @@ fi # Helper functions for option handling. -*- Autoconf -*- # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -762,7 +748,7 @@ AC_DEFUN([_AM_SET_OPTIONS], AC_DEFUN([_AM_IF_OPTION], [m4_ifset(_AM_MANGLE_OPTION([$1]), [$2], [$3])]) # Copyright (C) 1999-2013 Free Software Foundation, Inc. # Copyright (C) 1999-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -809,7 +795,7 @@ AC_LANG_POP([C])]) # For backward compatibility. AC_DEFUN_ONCE([AM_PROG_CC_C_O], [AC_REQUIRE([AC_PROG_CC])]) # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -828,7 +814,7 @@ AC_DEFUN([AM_RUN_LOG], # Check to make sure that the build environment is sane. -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Copyright (C) 1996-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -909,7 +895,7 @@ AC_CONFIG_COMMANDS_PRE( rm -f conftest.file ]) # Copyright (C) 2009-2013 Free Software Foundation, Inc. # Copyright (C) 2009-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -969,7 +955,7 @@ AC_SUBST([AM_BACKSLASH])dnl _AM_SUBST_NOTMAKE([AM_BACKSLASH])dnl ]) # Copyright (C) 2001-2013 Free Software Foundation, Inc. # Copyright (C) 2001-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -997,7 +983,7 @@ fi INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s" AC_SUBST([INSTALL_STRIP_PROGRAM])]) # Copyright (C) 2006-2013 Free Software Foundation, Inc. # Copyright (C) 2006-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading @@ -1016,7 +1002,7 @@ AC_DEFUN([AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE($@)]) # Check how to create a tarball. -*- Autoconf -*- # Copyright (C) 2004-2013 Free Software Foundation, Inc. # Copyright (C) 2004-2018 Free Software Foundation, Inc. # # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading
configure.ac +6 −4 Original line number Diff line number Diff line Loading @@ -56,7 +56,7 @@ dnl Process this file with autoconf to produce a configure script. AC_PREREQ([2.64]) m4_define([V_MAJOR], [2]) m4_define([V_MINOR], [5]) m4_define([V_MICRO], [0]) m4_define([V_MICRO], [2]) AC_INIT( [crac], Loading Loading @@ -153,7 +153,8 @@ AC_PROG_LN_S AC_SUBST([VERSION]) dnl Disable shared library construction by default (must appear before LT_INIT) AC_DISABLE_SHARED AC_ENABLE_SHARED AC_DISABLE_STATIC LT_INIT LT_PATH_LD Loading Loading @@ -307,7 +308,7 @@ AM_CONDITIONAL([INCLUDED_PROGRESSBAR], [test "x$with_included_ProgressBar" == "x AC_CHECK_LIB([z], [gzread], , [AC_MSG_ERROR([zlib not found, see http://www.zlib.net])]) AC_CHECK_LIB([hts], [hts_open], , AC_CHECK_LIB([hts], [hts_hopen], , [AC_MSG_ERROR([htslib not found, see http://www.htslib.org/])]) GK_OK=1 Loading Loading @@ -359,7 +360,8 @@ AS_IF([test "x$enable_shared" == "xyes" ], [AS_VAR_APPEND([ac_configure_args], [" --enable-shared"])], [AS_VAR_APPEND([ac_configure_args], [" --disable-shared"])]) AS_IF([test "x$enable_static" == "xyes" ], [AS_VAR_APPEND([ac_configure_args], [" --enable-static"])], [LDFLAGS="$LDFLAGS -all-static" AS_VAR_APPEND([ac_configure_args], [" --enable-static"])], [AS_VAR_APPEND([ac_configure_args], [" --disable-static"])]) dnl Forward FLAGS to libGkArrays/libProgressBar configure scripts if needed Loading
man/Makefile.in +25 −9 Original line number Diff line number Diff line # Makefile.in generated by automake 1.14.1 from Makefile.am. # Makefile.in generated by automake 1.16.1 from Makefile.am. # @configure_input@ # Copyright (C) 1994-2013 Free Software Foundation, Inc. # Copyright (C) 1994-2018 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, Loading Loading @@ -113,7 +113,17 @@ # # ############################################################################### VPATH = @srcdir@ am__is_gnu_make = test -n '$(MAKEFILE_LIST)' && test -n '$(MAKELEVEL)' am__is_gnu_make = { \ if test -z '$(MAKELEVEL)'; then \ false; \ elif test -n '$(MAKE_HOST)'; then \ true; \ elif test -n '$(MAKE_VERSION)' && test -n '$(CURDIR)'; then \ true; \ else \ false; \ fi; \ } am__make_running_with_option = \ case $${target_option-} in \ ?) ;; \ Loading Loading @@ -177,8 +187,6 @@ POST_UNINSTALL = : build_triplet = @build@ host_triplet = @host@ subdir = man DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/Makefile.am \ $(srcdir)/crac.1.in ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/config/m4/ltoptions.m4 \ Loading @@ -188,6 +196,7 @@ am__aclocal_m4_deps = $(top_srcdir)/config/m4/libtool.m4 \ $(top_srcdir)/configure.ac am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) DIST_COMMON = $(srcdir)/Makefile.am $(am__DIST_COMMON) mkinstalldirs = $(install_sh) -d CONFIG_HEADER = $(top_builddir)/config/config.h CONFIG_CLEAN_FILES = crac.1 Loading Loading @@ -243,6 +252,7 @@ am__installdirs = "$(DESTDIR)$(man1dir)" NROFF = nroff MANS = $(man_MANS) am__tagged_files = $(HEADERS) $(SOURCES) $(TAGS_FILES) $(LISP) am__DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/crac.1.in DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) ACLOCAL = @ACLOCAL@ ALLOCA = @ALLOCA@ Loading Loading @@ -291,6 +301,7 @@ LIBTOOL = @LIBTOOL@ LIPO = @LIPO@ LN_S = @LN_S@ LTLIBOBJS = @LTLIBOBJS@ LT_SYS_LIBRARY_PATH = @LT_SYS_LIBRARY_PATH@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MKDIR_P = @MKDIR_P@ Loading Loading @@ -361,6 +372,7 @@ pdfdir = @pdfdir@ prefix = @prefix@ program_transform_name = @program_transform_name@ psdir = @psdir@ runstatedir = @runstatedir@ sbindir = @sbindir@ sharedstatedir = @sharedstatedir@ srcdir = @srcdir@ Loading Loading @@ -396,14 +408,13 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps) echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu man/Makefile'; \ $(am__cd) $(top_srcdir) && \ $(AUTOMAKE) --gnu man/Makefile .PRECIOUS: Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @case '$?' in \ *config.status*) \ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \ *) \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__maybe_remake_depfiles)'; \ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__maybe_remake_depfiles);; \ esac; $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) Loading Loading @@ -472,7 +483,10 @@ ctags CTAGS: cscope cscopelist: distdir: $(DISTFILES) distdir: $(BUILT_SOURCES) $(MAKE) $(AM_MAKEFLAGS) distdir-am distdir-am: $(DISTFILES) @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ list='$(DISTFILES)'; \ Loading Loading @@ -626,6 +640,8 @@ uninstall-man: uninstall-man1 ps ps-am tags-am uninstall uninstall-am uninstall-man \ uninstall-man1 .PRECIOUS: Makefile # Tell versions [3.59,3.63) of GNU make to not export all variables. # Otherwise a system limit (for SysV at least) may be exceeded. Loading
