debian/changelog

@@ -2,12 +2,13 @@ discosnp (2.3.0-1) UNRELEASED; urgency=medium
 
   * Point watch file to Github
   * New upstream version
-  * debhelper 11
+  * debhelper 12
   * Point Vcs fields to salsa.debian.org
-  * Standards-Version: 4.2.1
+  * Standards-Version: 4.3.0
   * Remove trailing whitespace in debian/changelog
   * Remove trailing whitespace in debian/control
   * Remove trailing whitespace in debian/copyright
+  * Build-Depends: libboost-dev, libgatbcore-dev, libhdf5-dev, zlib1g-dev
 
  -- Andreas Tille <tille@debian.org>  Sat, 20 Oct 2018 10:56:58 +0200
 

debian/compat

-11
+12

debian/control

@@ -4,10 +4,13 @@ Uploaders: Olivier Sallou <osallou@debian.org>,
            Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper (>= 12~),
                cmake,
-               libgatbcore-dev
-Standards-Version: 4.2.1
+               libgatbcore-dev,
+               libboost-dev,
+               libhdf5-dev,
+               zlib1g-dev
+Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/discosnp
 Vcs-Git: https://salsa.debian.org/med-team/discosnp.git
 Homepage: http://colibread.inria.fr/discosnp/

debian/patches/series

+use_debian_packaged_gatb-core.patch

debian/patches/use_debian_packaged_gatb-core.patch

+Author: Andreas Tille <tille@debian.org>
+Last-Update: Mon, 21 Jan 2019 09:01:19 +0100
+Description: Use cmake input file of Debian packaged gatb-core
+
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -29,8 +29,8 @@ ENDIF()
+ ################################################################################
+ # Define cmake modules directory
+ ################################################################################
+-SET (GATB_CORE_HOME  ${PROJECT_SOURCE_DIR}/thirdparty/gatb-core/gatb-core)
+-SET (CMAKE_MODULE_PATH ${GATB_CORE_HOME}/cmake)
++include(GNUInstallDirs)
++SET (CMAKE_MODULE_PATH /usr/${CMAKE_INSTALL_LIBDIR}/cmake)
+ 
+ ################################################################################
+ # THIRD PARTIES