Commit 18020918 authored by Steffen Möller's avatar Steffen Möller
Browse files

Package review

parent 264817bc

debian/control

+3 −3
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@@ -4,9 +4,9 @@ Uploaders: Andreas Tille <tille@debian.org> 
Section: science

Priority: optional

Build-Depends: debhelper (>= 10)

Standards-Version: 3.9.8

Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/euler2.git

Vcs-Git: https://anonscm.debian.org/git/debian-med/euler2.git

Standards-Version: 4.1.3

Vcs-Browser: https://salsa.debian.org/med-team/euler2

Vcs-Git: https://salsa.debian.org/med-team/euler2.git

Homepage: http://nbcr.sdsc.edu/euler/document.htm



Package: euler2

debian/patches/fix_check.patch

0 → 100644
+13 −0
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Index: euler2/makealn.c

===================================================================

--- euler2.orig/makealn.c

+++ euler2/makealn.c

@@ -22,7 +22,7 @@ char    htmlout, caption[2000], ***conte

 void initenv(int argc, char **argv);

 void read_one_inteval(FILE *fp, READINTERVAL *readinterval, int num_intv);

 

-main(int argc, char **argv)

+int main(int argc, char **argv)

 {

   int i, m, l, j, k, n;

   int max_leg, max_name_leg;

debian/patches/series

+1 −0
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@@ -4,3 +4,4 @@ 
20_perl_warnings.patch

20_exit_better_than_crash.patch

10_increase_maq_seq.patch

fix_check.patch

debian/rules

+15 −0
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@@ -2,3 +2,18 @@ 


%:

	dh $@



override_dh_auto_test:

	@echo "Not installing"



override_dh_auto_install:

	@echo "Not testing"



override_dh_auto_clean:

	if [ -r Makefile ]; then $(MAKE) clean; fi

	rm -f errcorr_fin_mem errcorr_pair_mem euler_cons euler_db \

	 euler_et makealn makeintv over-align-all over-align-phrap \

	 over-repeat-end over-repeat-end-po over-repeat-new overlapper-all \

	 pairreads pairreads1 pairreads2 pairreads3 pairreads_file po-prod \

	 trans_qual trimseq_qual