debian/changelog

+fasta3 (36.3.8h-2) unstable; urgency=medium
+
+  * Team upload.
+  * Breaks+Replaces: fasta3 (<< 36.3.8h)
+    Closes: #948597
+  * Remove trailing whitespace in debian/copyright
+  * Remove trailing whitespace in debian/rules
+  * Trim trailing whitespace.
+  * Use secure URI in Homepage field.
+  * Fix regexp in d/copyright
+  * Package fasta3-doc in section non-free/doc
+
+ -- Andreas Tille <tille@debian.org>  Sat, 11 Jan 2020 06:55:15 +0100
+
 fasta3 (36.3.8h-1) unstable; urgency=medium
 
   [ Andreas Tille ]

debian/control

@@ -9,7 +9,7 @@ Build-Depends: debhelper-compat (= 12),
 Standards-Version: 4.4.1
 Vcs-Browser: https://salsa.debian.org/med-team/fasta3
 Vcs-Git: https://salsa.debian.org/med-team/fasta3.git
-Homepage: http://fasta.bioch.virginia.edu
+Homepage: https://fasta.bioch.virginia.edu
 
 Package: fasta3
 Architecture: any
@@ -61,8 +61,11 @@ Description: tools for searching collections of biological sequences
 
 Package: fasta3-doc
 Architecture: all
+Section: non-free/doc
 Depends: ${shlibs:Depends},
          ${misc:Depends}
+Breaks: fasta3 (<< 36.3.8h)
+Replaces: fasta3 (<< 36.3.8h)
 Description: user guide for FASTA tools
  The FASTA programs find regions of local or global similarity between
  Protein or DNA sequences, either by searching Protein or DNA databases,

debian/copyright

@@ -21,7 +21,7 @@ Copyright: 2004, Erik Lindahl <lindahl@sbc.su.se>
     Stockholm Bioinformatics Center, 2004
 License: Apache-2.0
 
-Files: src/glo[bc]al_sse2.[ch]
+Files: src/glo*sse2.*
        src/smith_waterman_sse2.c
 Copyright: 2006,2010 Michael Farrar <farrar.michael@gmail.com>
 License: Academics-only

debian/rules

@@ -32,4 +32,3 @@ override_dh_auto_clean:
 
 override_dh_compress:
 	dh_compress --exclude=.pdf
-