Commit 75cbd09b authored by Andreas Tille's avatar Andreas Tille
Browse files

New upstream version 1.4.1+git20180206.6f8fce8+dfsg

parent 8e45a9a1

gatb-core/.gitignore

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CMakeLists.txt.user

/build*

/.settings/

/.cproject

*.leon

.DS_Store

gatb-core/CMakeLists.txt

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@@ -274,8 +274,11 @@ IF (EXISTS "${PROJECT_SOURCE_DIR}/examples") 
        ADD_SUBDIRECTORY(examples)

    ENDIF()

ENDIF()



IF (NOT DEFINED GATB_CORE_EXCLUDE_EXAMPLES)

    # add example snippets into binary archive (use by CPack directive)

    INSTALL(DIRECTORY "${PROJECT_SOURCE_DIR}/examples/" DESTINATION "examples")

ENDIF()



################################################################################

#  INSTALL

gatb-core/doc/book/.gitignore

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/main.aux

/main.log

/main.pdf

gatb-core/src/gatb/bank/api/IBank.hpp

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@@ -92,6 +92,10 @@ public: 
	 * \return estimation of the number of sequences of sub bank i */

	virtual int64_t estimateNbItemsBanki (int i) = 0;

	

	/** Return the vector of  sub IBank objects (in case of bank composite), or a vector containing only the bank itself

	 * \return the IBank objects. */

	virtual const std::vector<IBank*> getBanks() const  = 0;

	

    /** \copydoc tools::collections::Iterable::iterator */

    virtual tools::dp::Iterator<Sequence>* iterator () = 0;

gatb-core/src/gatb/bank/impl/AbstractBank.hpp

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@@ -29,6 +29,7 @@ 
/********************************************************************************/



#include <gatb/bank/api/IBank.hpp>

#include <vector>



/********************************************************************************/

namespace gatb      {
@@ -58,6 +59,12 @@ public: 
	

	int64_t estimateNbItemsBanki (int i)  { return this->estimateNbItems(); }



	/** \copydoc IBank::getBanks */

	const std::vector<IBank*> getBanks() const  {

		std::vector<IBank*> _banks;

		_banks.push_back((IBank *)this);

		return _banks;

	};



	

    /** \copydoc IBank::estimateNbItems */