debian/changelog

+gbrowse (2.56+dfsg-4) unstable; urgency=medium
+
+  * Update URL in watch file
+  * debhelper 11
+  * Point Vcs fields to salsa.debian.org
+  * Standards-Version: 4.2.1
+
+ -- Andreas Tille <tille@debian.org>  Wed, 03 Oct 2018 15:07:54 +0200
+
 gbrowse (2.56+dfsg-3) unstable; urgency=medium
 
   * Fix broken link

debian/compat

-10
+11

debian/control

@@ -8,7 +8,7 @@ Section: science
 Testsuite: autopkgtest-pkg-perl
 Priority: optional
 Build-Depends: bioperl,
-               debhelper (>= 10),
+               debhelper (>= 11~),
                dh-apache2,
                dh-exec,
                apache2-dev,
@@ -32,9 +32,9 @@ Build-Depends: bioperl,
                libmodule-build-perl,
                libcgi-pm-perl | perl (<< 5.19),
                rename
-Standards-Version: 4.1.0
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/gbrowse.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/gbrowse.git
+Standards-Version: 4.2.1
+Vcs-Browser: https://salsa.debian.org/med-team/gbrowse
+Vcs-Git: https://salsa.debian.org/med-team/gbrowse.git
 Homepage: http://www.gbrowse.org/
 
 Package: gbrowse
@@ -58,7 +58,7 @@ Depends: ${misc:Depends},
          libjs-prototype,
          libjs-scriptaculous,
          libvm-ec2-perl,
-         lsb-base (>= 3.0-6)
+         lsb-base
 Recommends: ${misc:Recommends}
 Suggests: gbrowse-data,
           gbrowse-calign,

debian/copyright

-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Source: http://search.cpan.org/dist/GBrowse/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Source: https://github.com/GMOD/GBrowse/releases
 Files-Excluded: */contrib
 
 Files: *
@@ -127,7 +127,8 @@ License: MIT or GPL
  your site. Copy the files locally to your server instead.
 
 Files: debian/*
-Copyright: 2011, Olivier Sallou <olivier.sallou@irisa.fr>
+Copyright: 2011-2015 Olivier Sallou <olivier.sallou@irisa.fr>
+           2015-2018 Andreas Tille <tille@debian.org>
 License: Artistic-2.0 or GPL-1+
 
 License: Artistic

debian/patches/manpages.patch

@@ -2,7 +2,7 @@ Subject: fix POD-generated manual pages
 Description: upstream pages contain errors
 Author: Olivier Sallou <osallou@debian.org>
 Last-Updated: 2012-09-25
-Forwaded: yes
+Forwarded: yes
 Bug: https://sourceforge.net/tracker/?func=detail&aid=3571433&group_id=27707&atid=391291
 Bug-Debian: https://bugs.debian.org/645861
 

debian/patches/skipRenderFarmTest_UpstreamBug12

-This patch applied to version 2.54 but is skiped in favour of
-   debian/tests/pkg-perl/smoke-skip
-mentioning the 3 tests that are to be ignored
-
-Subject: remove renderfarm tests
-Description: there is an upstream bug with renderfarm involved
- tests. Upstream bug id 12 has been created witj instructions to
- solve the issue. Runtime has been tested with no issue.
- This patch remove tests using renderfarm feature.
-Author: Olivier Sallou <osallou@debian.org>
-Last-Updated: 2012-03-07
---- a/t/03.render.t
-+++ b/t/03.render.t
-@@ -16,9 +16,10 @@
- use lib "$Bin/testdata";
- use TemplateCopy; # for the template_copy() function
- 
--use constant TEST_COUNT => 150;
-+use constant TEST_COUNT => 0;
- use constant CONF_FILE  => "$Bin/testdata/conf/GBrowse.conf";
- 
-+exit 0;
- my $PID;
- 
- BEGIN {
---- a/t/04.remoteserver.t
-+++ b/t/04.remoteserver.t
-@@ -12,10 +12,11 @@
- use CGI;
- use FindBin '$Bin';
- 
--use constant TEST_COUNT => 47;
-+use constant TEST_COUNT => 0;
- use constant CONF_FILE  => "$Bin/testdata/conf/GBrowse.conf";
- use constant DEBUG => 0;
- 
-+exit 0;
- my $PID;
- 
- BEGIN {
---- a/t/06.featuresearch.t
-+++ b/t/06.featuresearch.t
-@@ -11,9 +11,10 @@
- use CGI;
- use FindBin '$Bin';
- 
--use constant TEST_COUNT => 26;
-+use constant TEST_COUNT => 0;
- use constant CONF_FILE  => "$Bin/testdata/conf/GBrowse.conf";
- 
-+exit 0;
- my $PID;
- 
- BEGIN {

debian/watch

 version=4
-opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g" \
-	http://search.cpan.org/dist/GBrowse .*/GBrowse-v?(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz|zip)
+opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,uversionmangle=s/_/./g" \
+        https://github.com/GMOD/GBrowse/releases .*/archive/release@ANY_VERSION@@ARCHIVE_EXT@