debian/changelog

+genomethreader (1.7.3+dfsg-2) unstable; urgency=medium
+
+  * Fix builds on some archs by removing -m32/-m64.
+  * Use deterministic sorted wildcard order in Makefile.
+  * Bump Standards-Version.
+
+ -- Sascha Steinbiss <satta@debian.org>  Thu, 23 Jan 2020 00:02:20 +0100
+
 genomethreader (1.7.3+dfsg-1) unstable; urgency=medium
 
   * Initial release (Closes: #948526)

debian/control

@@ -14,7 +14,7 @@ Build-Depends: debhelper (>= 12),
                liblua5.1-0-dev,
                libtre-dev,
                asciidoctor
-Standards-Version: 4.4.1
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/genomethreader
 Vcs-Git: https://salsa.debian.org/med-team/genomethreader.git
 Homepage: http://genomethreader.org

debian/patches/m32-m64-ignore.patch

+--- a/Makefile
++++ b/Makefile
+@@ -108,16 +108,6 @@
+   BIT=32bit
+ endif
+ 
+-ifeq ($(m32),yes)
+-  GTH_CFLAGS += -m32
+-  GTH_LDFLAGS += -m32
+-endif
+-
+-ifeq ($(m64),yes)
+-  GTH_CFLAGS += -m64
+-  GTH_LDFLAGS += -m64
+-endif
+-
+ # libraries for which we build replacements (that also appear in dependencies)
+ #EXP_LDLIBS+=-lz -lbz2 -lm -ldl
+ #OVERRIDELIBS:=../genometools/lib/libbz2.a

debian/patches/reproducible.patch

+--- a/Makefile
++++ b/Makefile
+@@ -184,7 +184,7 @@
+ LIBGENOMETHREADER_DIRS:= src/libgenomethreader src/gth
+ 
+ # the GenomeThreader library
+-LIBGENOMETHREADER_SRC:=$(foreach DIR,$(LIBGENOMETHREADER_DIRS),$(wildcard $(DIR)/*.c))
++LIBGENOMETHREADER_SRC:=$(foreach DIR,$(LIBGENOMETHREADER_DIRS),$(sort $(wildcard $(DIR)/*.c)))
+ LIBGENOMETHREADER_OBJ:=$(LIBGENOMETHREADER_SRC:%.c=obj/%.o)
+ LIBGENOMETHREADER_DEP:=$(LIBGENOMETHREADER_SRC:%.c=obj/%.d)
+ 

debian/patches/series

@@ -2,3 +2,5 @@ debian-gt-libs.patch
 gt-path-fix.patch
 hardening.patch
 search-paths.patch
+m32-m64-ignore.patch
+reproducible.patch