debian/changelog

+htslib (1.10-2) unstable; urgency=medium
+
+  * Fix check for config.mk.
+  * Simplified arch-independent build
+  * libhts2 -> libhts3 to match the new SONAME
+  * Update the symbols as well
+
+ -- Michael R. Crusoe <michael.crusoe@gmail.com>  Fri, 13 Dec 2019 11:04:33 +0100
+
 htslib (1.10-1) unstable; urgency=medium
 
   * New upstream release.

debian/control

@@ -13,12 +13,12 @@ Build-Depends: debhelper (>= 11~),
                libssl-dev,
                zlib1g-dev,
 	       libdeflate-dev
-Standards-Version: 4.3.0
+Standards-Version: 4.4.1
 Vcs-Browser: https://salsa.debian.org/med-team/htslib
 Vcs-Git: https://salsa.debian.org/med-team/htslib.git
 Homepage: https://github.com/samtools/htslib
 
-Package: libhts2
+Package: libhts3
 Architecture: any
 Multi-Arch: same
 Section: libs
@@ -42,7 +42,7 @@ Package: libhts-dev
 Architecture: any
 Multi-Arch: same
 Section: libdevel
-Depends: libhts2 (= ${binary:Version}),
+Depends: libhts3 (= ${binary:Version}),
          liblzma-dev,
          zlib1g-dev,
          ${misc:Depends}

debian/rules

@@ -27,7 +27,7 @@ endif
 	autoconf
 	dh_auto_configure -- --enable-libcurl --enable-gcs --enable-s3
 	
-override_dh_auto_build:
+override_dh_auto_build-arch:
 	dh_auto_build -- \
 	  CFLAGS="$$(dpkg-buildflags --get CFLAGS)" \
 	  CPPFLAGS="-I. -DSAMTOOLS=1 $$(dpkg-buildflags --get CPPFLAGS)" \
@@ -36,7 +36,9 @@ override_dh_auto_build:
 	  libdir=/usr/lib/$(DEB_HOST_MULTIARCH)
 # re-try later	  LDLIBS=-lhts \
 
-override_dh_auto_install:
+override_dh_auto_build-indep:
+
+override_dh_auto_install-arch:
 	for binary in sam test-regidx hts_endian test-bcf-sr test_bgzf ; do \
 	    rm $(CURDIR)/test/$${binary} ; \
 	done
@@ -46,12 +48,14 @@ override_dh_auto_install:
 	$(RM) -r test
 	mv test_backup test
 
-override_dh_install:
-	dh_install
-ifeq (,$(wildcard ./debian/htslib-test/usr/share/htslib-test/config.mk))
+override_dh_auto_install-indep:
+
+override_dh_auto_test-indep:
+
+override_dh_install-indep:
+	dh_install --indep
 	sed -i 's/-ffile-prefix-map=[^[:space:]]* //g' debian/htslib-test/usr/share/htslib-test/config.mk
 	sed -i 's/-fdebug-prefix-map=[^[:space:]]* //g' debian/htslib-test/usr/share/htslib-test/config.mk
-endif
 
 override_dh_installchangelogs:
 	dh_installchangelogs NEWS