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debian/patches/10_remove_python2_shebang.patch 0 → 100644
View file @ 4ed3755d
Author: Thiago Franco Moraes
Last-Update: 2018-09-11 14:54:25 -0300
Description: Remove python2 shebangs
diff --git a/app.py b/app.py
index 28dcbdd..2942f04 100644
--- a/app.py
+++ b/app.py
@@ -1,4 +1,4 @@
-#!/usr/bin/python
+#!/usr/bin/env python3
#--------------------------------------------------------------------------
# Software: InVesalius - Software de Reconstrucao 3D de Imagens Medicas
# Copyright: (C) 2001 Centro de Pesquisas Renato Archer
diff --git a/invesalius/data/measures.py b/invesalius/data/measures.py
index 565cf0c..0567116 100644
--- a/invesalius/data/measures.py
+++ b/invesalius/data/measures.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
from six import with_metaclass
diff --git a/invesalius/data/viewer_slice.py b/invesalius/data/viewer_slice.py
index 0b34ce0..a5d3cae 100755
--- a/invesalius/data/viewer_slice.py
+++ b/invesalius/data/viewer_slice.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: utf-8 -*-
#--------------------------------------------------------------------------
# Software: InVesalius - Software de Reconstrucao 3D de Imagens Medicas
diff --git a/invesalius/data/viewer_volume.py b/invesalius/data/viewer_volume.py
index 3de5335..233e2b1 100755
--- a/invesalius/data/viewer_volume.py
+++ b/invesalius/data/viewer_volume.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: utf-8 -*-
#--------------------------------------------------------------------------
diff --git a/invesalius/gui/data_notebook.py b/invesalius/gui/data_notebook.py
index ef119a9..e9772a1 100644
--- a/invesalius/gui/data_notebook.py
+++ b/invesalius/gui/data_notebook.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
#--------------------------------------------------------------------------
# Software: InVesalius - Software de Reconstrucao 3D de Imagens Medicas
diff --git a/invesalius/gui/dialogs.py b/invesalius/gui/dialogs.py
index c9793db..aa2dde1 100644
--- a/invesalius/gui/dialogs.py
+++ b/invesalius/gui/dialogs.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
#--------------------------------------------------------------------------
# Software: InVesalius - Software de Reconstrucao 3D de Imagens Medicas
diff --git a/invesalius/gui/dicom_preview_panel.py b/invesalius/gui/dicom_preview_panel.py
index 5305eec..d9fa764 100644
--- a/invesalius/gui/dicom_preview_panel.py
+++ b/invesalius/gui/dicom_preview_panel.py
@@ -17,7 +17,6 @@
# detalhes.
#--------------------------------------------------------------------------
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
#TODO: To create a beautiful API
diff --git a/invesalius/gui/widgets/gradient.py b/invesalius/gui/widgets/gradient.py
index fe246ae..29d7551 100755
--- a/invesalius/gui/widgets/gradient.py
+++ b/invesalius/gui/widgets/gradient.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
#--------------------------------------------------------------------------
diff --git a/invesalius/gui/widgets/slice_menu.py b/invesalius/gui/widgets/slice_menu.py
index cdb66a4..737be02 100644
--- a/invesalius/gui/widgets/slice_menu.py
+++ b/invesalius/gui/widgets/slice_menu.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
#--------------------------------------------------------------------------
diff --git a/invesalius/i18n.py b/invesalius/i18n.py
index c47340a..7259026 100644
--- a/invesalius/i18n.py
+++ b/invesalius/i18n.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: UTF-8 -*-
#--------------------------------------------------------------------------
diff --git a/invesalius/math_utils.py b/invesalius/math_utils.py
index dfe9a86..eddbb82 100644
--- a/invesalius/math_utils.py
+++ b/invesalius/math_utils.py
@@ -1,4 +1,3 @@
-#!/usr/bin/env python
# -*- coding: utf-8 -*-
import math
debian/patches/series
View file @ 4ed3755d
10_sample_path.patch
10_import_cython_modules.patch
10_remove_python2_shebang.patch
invesalius/constants.py
View file @ 4ed3755d
......@@ -355,7 +355,7 @@ if hasattr(sys,"frozen") and (sys.frozen == "windows_exe"\
else:
ICON_DIR = os.path.abspath(os.path.join(FILE_PATH, u'..', u'icons'))
SAMPLE_DIR = u"/usr/share/doc/invesalius-examples/examples/"
SAMPLE_DIR = os.path.abspath(os.path.join(FILE_PATH, u'..', u'samples'))
DOC_DIR = os.path.abspath(os.path.join(FILE_PATH, u'..', u'docs'))
folder=RAYCASTING_PRESETS_DIRECTORY= os.path.abspath(os.path.join(u".",
......
invesalius/data/mask.py
View file @ 4ed3755d
......@@ -30,7 +30,7 @@ import invesalius.constants as const
import invesalius.data.imagedata_utils as iu
import invesalius.session as ses
from invesalius_cy import floodfill
from . import floodfill
from wx.lib.pubsub import pub as Publisher
from scipy import ndimage
......
invesalius/data/slice_.py
View file @ 4ed3755d
......@@ -33,9 +33,9 @@ import invesalius.session as ses
import invesalius.utils as utils
from invesalius.data.mask import Mask
from invesalius.project import Project
from invesalius_cy import mips
from invesalius.data import mips
from invesalius_cy import transforms
from invesalius.data import transforms
import invesalius.data.transformations as transformations
OTHER=0
PLIST=1
......
invesalius/data/styles.py
View file @ 4ed3755d
......@@ -47,7 +47,7 @@ from skimage.morphology import watershed
import invesalius.gui.dialogs as dialogs
from invesalius.data.measures import MeasureData
from invesalius_cy import floodfill
from . import floodfill
import invesalius.data.watershed_process as watershed_process
import invesalius.utils as utils
......
invesalius/data/surface.py
View file @ 4ed3755d
......@@ -48,7 +48,7 @@ import invesalius.data.surface_process as surface_process
import invesalius.utils as utl
import invesalius.data.vtk_utils as vu
from invesalius_cy import cy_mesh
from invesalius.data import cy_mesh
# TODO: Verificar ReleaseDataFlagOn and SetSource
class Surface():
......
setup.py
View file @ 4ed3755d
......@@ -11,26 +11,26 @@ import numpy
if sys.platform.startswith('linux'):
setup(
cmdclass = {'build_ext': build_ext},
ext_modules = cythonize([ Extension("invesalius_cy.mips", ["invesalius_cy/mips.pyx"],
ext_modules = cythonize([ Extension("invesalius.data.mips", ["invesalius/data/mips.pyx"],
include_dirs = [numpy.get_include()],
extra_compile_args=['-fopenmp'],
extra_link_args=['-fopenmp']),
Extension("invesalius_cy.interpolation", ["invesalius_cy/interpolation.pyx"],
Extension("invesalius.data.interpolation", ["invesalius/data/interpolation.pyx"],
include_dirs=[numpy.get_include()],
extra_compile_args=['-fopenmp',],
extra_link_args=['-fopenmp',]),
Extension("invesalius_cy.transforms", ["invesalius_cy/transforms.pyx"],
Extension("invesalius.data.transforms", ["invesalius/data/transforms.pyx"],
include_dirs=[numpy.get_include()],
extra_compile_args=['-fopenmp',],
extra_link_args=['-fopenmp',]),
Extension("invesalius_cy.floodfill", ["invesalius_cy/floodfill.pyx"],
Extension("invesalius.data.floodfill", ["invesalius/data/floodfill.pyx"],
include_dirs=[numpy.get_include()],
language='c++',),
Extension("invesalius_cy.cy_mesh", ["invesalius_cy/cy_mesh.pyx"],
Extension("invesalius.data.cy_mesh", ["invesalius/data/cy_mesh.pyx"],
include_dirs=[numpy.get_include()],
extra_compile_args=['-fopenmp', '-std=c++11'],
extra_link_args=['-fopenmp', '-std=c++11'],
......