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Commits on Source (4)
jellyfish (2.3.0-3) unstable; urgency=medium
* Upstream only supports AMD64 (Closes: #941920)
* Use secure URI in Homepage field.
* Set upstream metadata fields: Repository.
-- Michael R. Crusoe <michael.crusoe@gmail.com> Sun, 17 Nov 2019 14:23:43 +0100
jellyfish (2.3.0-2) unstable; urgency=medium
* Restore jellyfish-examples, needed for the autopkgtest (Closes: #941262)
......
......@@ -23,10 +23,10 @@ Build-Depends: debhelper-compat (= 12),
Standards-Version: 4.4.0
Vcs-Browser: https://salsa.debian.org/med-team/jellyfish
Vcs-Git: https://salsa.debian.org/med-team/jellyfish.git
Homepage: http://www.cbcb.umd.edu/software/jellyfish/
Homepage: https://www.cbcb.umd.edu/software/jellyfish/
Package: jellyfish
Architecture: any
Architecture: amd64
Depends: ${shlibs:Depends},
${misc:Depends},
libjellyfish-2.0-2 (= ${binary:Version})
......@@ -46,7 +46,7 @@ Description: count k-mers in DNA sequences
format using the "jellyfish dump" command.
Package: libjellyfish-2.0-2
Architecture: any
Architecture: amd64
Multi-Arch: same
Section: libs
Depends: ${shlibs:Depends},
......@@ -70,7 +70,7 @@ Description: count k-mers in DNA sequences (dynamic library of jellyfish)
jellyfish is linked to.
Package: libjellyfish-2.0-dev
Architecture: any
Architecture: amd64
Multi-Arch: same
Section: libdevel
Depends: ${misc:Depends},
......@@ -94,7 +94,7 @@ Description: count k-mers in DNA sequences (development files of jellyfish)
header files)
Package: python3-dna-jellyfish
Architecture: any
Architecture: amd64
Section: python
Depends: ${python3:Depends},
${misc:Depends},
......@@ -117,7 +117,7 @@ Description: count k-mers in DNA sequences (Python bindings of jellyfish)
This package contains the Python bindings of jellyfish.
Package: libjellyfish-perl
Architecture: any
Architecture: amd64
Multi-Arch: same
Section: perl
Depends: ${perl:Depends},
......@@ -141,7 +141,7 @@ Description: count k-mers in DNA sequences (Perl bindings of jellyfish)
This package contains the Perl bindings of jellyfish.
Package: jellyfish-examples
Architecture: any
Architecture: amd64
Depends: jellyfish,
${shlibs:Depends},
${misc:Depends}
......
Reference:
Author: Guillaume Marcais and Carl Kingsford
Title: >
A fast, lock-free approach for efficient parallel counting of
occurrences of k-mers
Title: "A fast, lock-free approach for efficient parallel counting of occurrences\
\ of k-mers\n"
Journal: Bioinformatics
Year: 2011
Volume: 27
......@@ -18,3 +17,4 @@ Registry:
Entry: jellyfish
- Name: conda:bioconda
Entry: jellyfish
Repository: https://github.com/gmarcais/Jellyfish