Commit 50805531 authored by Liubov Chuprikova's avatar Liubov Chuprikova
Browse files

Add autopkgtest to test atac for now

parent 9b6945a6

debian/atac.docs

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README.atac

debian/tests/atac-unit-test

debian/tests/test-data/test_data.tar.gz

debian/source/include-binaries

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debian/tests/test-data/test_data.tar.gz

debian/tests/atac-unit-test

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#!/bin/sh -e



pkg="atac"



if [ "$AUTOPKGTEST_TMP" = "" ]; then

    AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)

    trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM

fi

cd $AUTOPKGTEST_TMP

cp -a /usr/share/doc/${pkg}/test_data.tar.gz .

tar -xzvf *.tar.gz; rm *.tar.gz



# Run atac:

atac -meryldir meryldir -dir results -id1 Ecoli -seq1 GCF_000195995.1_ASM19599v1_genomic.fna \

	-id2 Sent -seq2 GCF_000005845.2_ASM584v2_genomic.fna

debian/tests/control

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Tests: atac-unit-test

Depends: @

Restrictions: allow-stderr

debian/tests/test-data/test_data.tar.gz

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+2.86 MiB

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