Add autopkgtest

Notes on how the packages can be tested in order to confirm their integrity.

____________________________________________________________________________

To test atac run:

	sh atac-unit-test

NOTE: Atac test fails with a segmentation fault. Feel free to use `reportbug

atac` if you have some idea how to fix the test.

To test sim4db run:

        sh sim4db-unit-test

README.atac

debian/tests/atac-unit-test

debian/tests/test-data/test_data.tar.gz

debian/README.test

kmer (0~20150903+r2013-5) UNRELEASED; urgency=medium

  * Team upload.

  * Add autopkgtest.

 -- Liubov Chuprikova <chuprikovalv@gmail.com>  Mon, 20 Aug 2018 09:46:55 +0200

kmer (0~20150903+r2013-4) unstable; urgency=medium

  * Team upload.

	2015-2016 Afif Elghraoui <afif@debian.org>

License: GPL-2+

Files: debian/tests/test-data/test_data.tar.gz

Copyright: 1996-2018 NCBI

License: unrestricted

 Databases of molecular data on the NCBI Web site include such examples as

 nucleotide sequences (GenBank), protein sequences, macromolecular

 structures, molecular variation, gene expression, and mapping data. They

 are designed to provide and encourage access within the scientific

 community to sources of current and comprehensive information. Therefore,

 NCBI itself places no restrictions on the use or distribution of the data

 contained therein. Nor do we accept data when the submitter has requested

 restrictions on reuse or redistribution.

Comment:

 The test data files contained in the archive were downloaded from NCBI RefSeq

 and EST databases using wget and idfetch (from ncbi-tools-bin package):

    wget ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/bacteria/Mycobacterium_tuberculosis/latest_assembly_versions/GCF_000195955.2_ASM19595v2/GCF_000195955.2_ASM19595v2_genomic.fna.gz

    wget ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/bacteria/Mycobacterium_leprae/latest_assembly_versions/GCF_000195855.1_ASM19585v1/GCF_000195855.1_ASM19585v1_genomic.fna.gz

    idfetch -G EST_GIs.txt -t 5 -o ESTs.fasta

License: GPL-2+

 This package is free software; you can redistribute it and/or modify

 it under the terms of the GNU General Public License as published by

README.sim4db

debian/tests/sim4db-unit-test

debian/tests/test-data/test_data.tar.gz

debian/README.test