Commit 27b63b35 authored by Andreas Tille's avatar Andreas Tille
Browse files

Adapt from kraken to kraken2

parent 8c0a2d96

debian/dirs

+1 −1
Original line number Diff line number Diff line 
usr/bin

usr/lib/kraken
 
usr/lib/kraken2

debian/patches/fix_install.patch

0 → 100644
+16 −0
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Author: Andreas Tille <tille@debian.org>

Last-Update: Wed, 13 Mar 2019 15:46:40 +0100

Description: The temporary dir where to move the files for packaging is

 different from the final location.  Hardcode the final location here.



--- a/install_kraken2.sh

+++ b/install_kraken2.sh

@@ -31,7 +31,7 @@ for file in scripts/*

 do

   perl -pl -e 'BEGIN { while (@ARGV) { $_ = shift; ($k,$v) = split /=/, $_, 2; $H{$k} = $v } }'\

            -e 's/#####=(\w+)=#####/$H{$1}/g' \

-           "KRAKEN2_DIR=$KRAKEN2_DIR" "VERSION=$VERSION" \

+           "KRAKEN2_DIR=/usr/lib/kraken2" "VERSION=$VERSION" \

            < "$file" > "$KRAKEN2_DIR/$(basename $file)"

   if [ -x "$file" ]

   then

debian/patches/series

0 → 100644
+1 −0
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fix_install.patch

debian/rules

+6 −5
Original line number Diff line number Diff line
@@ -2,24 +2,25 @@ 


# DH_VERBOSE := 1



export DEB_BUILD_MAINT_OPTIONS = hardening=+all



include /usr/share/dpkg/default.mk



export DEB_BUILD_MAINT_OPTIONS = hardening=+all

export KRAKEN2_DIR=$(CURDIR)/debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)



%:

	dh $@  --sourcedirectory=src



override_dh_link:

	dh_link

	for file in $(CURDIR)/debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)/kraken* ; do \

	for file in $(KRAKEN2_DIR)/* ; do \

	    if ! echo $${file} | grep -q '\.pm$$' ; then \

		ln -s ../lib/$(DEB_SOURCE)/`basename $${file}` $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/`basename $${file}` ; \

	    fi \

	done



override_dh_auto_install:

	dh_auto_install -- KRAKEN_DIR=$(CURDIR)/debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)

	./install_kraken.sh /usr/lib/$(DEB_SOURCE) $(DEB_SOURCE)

	dh_auto_install -- KRAKEN2_DIR=$(KRAKEN2_DIR)

	./install_kraken2.sh $(KRAKEN2_DIR)



override_dh_install:

	dh_install