Preparing for upload to experimental. (690c74bd) · Commits · Debian Med / lagan

debian/changelog

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		lagan (2.0-2) experimental; urgency=low

		* Initial release to experimental to invite peer review (Closes: #908215).
		* Added man page for mlagan, also added *.pl scripts to /usr/bin
		* Added embarrassingly simple test routine to run "mlagan -h"
		* Solved compile time "ambiguity" error
		* d/control:
		- Bumped policy to 4.2.1
		- Adjusted URLs to repository
		* d/changelog: updated GSF address
		* lintian overrides for .pl endings

		-- Steffen Moeller <moeller@debian.org> Fri, 07 Sep 2018 14:10:07 +0200

		lagan (2.0-1) UNRELEASED; urgency=low

		* Initial release
		* TODO:
		- fix installation location possibly wrapper script featuring
		some $lagandir path variable (/usr/lib/lagan ???)

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		Source: lagan
		Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
		Uploaders: Andreas Tille <tille@debian.org>
		Uploaders: Andreas Tille <tille@debian.org>, Steffen Moeller <moeller@debian.org>
		Section: science
		Priority: optional
		Build-Depends: debhelper (>= 10),
		libboost-dev
		Standards-Version: 4.1.1
		Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/lagan.git
		Vcs-Git: https://anonscm.debian.org/git/debian-med/lagan.git
		Standards-Version: 4.2.1
		Vcs-Browser: https://salsa.debian.org/med-team/lagan
		Vcs-Git: https://salsa.debian.org/med-team/lagan.git
		Homepage: http://lagan.stanford.edu/lagan_web/index.shtml

		Package: lagan
		Architecture: any
		Depends: ${shlibs:Depends},
		${misc:Depends}
		Description: highly parametrizable pairwise global alignment program
		Description: highly parametrizable pairwise global genome sequence aligner
		Lagan takes local alignments generated by CHAOS as anchors, and limits
		the search area of the Needleman-Wunsch algorithm around these anchors.
		.

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		@@ -7,26 +7,25 @@ Files-Excluded:

		Files: *
		Copyright: © 2003-2006 Michael Brudno, Chuong Do, et. al.
		License: GPLv2+
		License: GPL-2.0+

		Files: debian/*
		Copyright: © 2012-2013 Andreas Tille <tille@debian.org>
		License: GPLv2+
		License: GPL-2.0+

		License: GPLv2+
		This program is free software; you can redistribute it and/or modify
		License: GPL-2.0+
		This package is free software; you can redistribute it and/or modify
		it under the terms of the GNU General Public License as published by
		the Free Software Foundation; either version 2 of the License, or
		(at your option) any later version.
		.
		This program is distributed in the hope that it will be useful,
		This package is distributed in the hope that it will be useful,
		but WITHOUT ANY WARRANTY; without even the implied warranty of
		MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
		GNU General Public License for more details.
		.
		You should have received a copy of the GNU General Public License
		along with this program; if not, write to the Free Software
		Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
		along with this program. If not, see <https://www.gnu.org/licenses/>
		.
		On Debian systems you can find the full text of the GPL 2+ license
		at /usr/share/common-licenses/GPL-2.
		On Debian systems, the complete text of the GNU General
		Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".

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