debian/control

@@ -4,7 +4,7 @@ Uploaders: Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
 Build-Depends: debhelper (>= 11~),
-               python-all,
+               python3-all,
                dh-python
 Standards-Version: 4.2.0
 Vcs-Browser: https://salsa.debian.org/med-team/lefse
@@ -13,7 +13,7 @@ Homepage: https://bitbucket.org/biobakery/biobakery/wiki/lefse
 
 Package: lefse
 Architecture: all
-Depends: ${python:Depends},
+Depends: ${python3:Depends},
          ${misc:Depends}
 Description: determine features of organisms, clades, taxonomic units, genes
  LEfSe (Linear discriminant analysis Effect Size) determines the features

debian/patches/series

+2to3.patch

debian/rules

@@ -4,7 +4,7 @@
 DESTDIR=debian/lefse/usr/share/lefse
 
 %:
-	dh $@  --with python2
+	dh $@  --with python3
 
 override_dh_auto_install:
 	mkdir -p $(DESTDIR)