debian/mans/plot_features.1

@@ -63,7 +63,7 @@ unused
 the format for the output file
 .TP
 \fB\-f\fR {all,diff,one}
-wheter to plot all features (all), only those
+whether to plot all features (all), only those
 differentially abundant according to LEfSe or only one
 (the one given with \fB\-\-feature_name\fR)
 .TP

debian/mans/plot_res.1

@@ -60,7 +60,7 @@ only for vertical histograms
 set the color of the background
 .TP
 \fB\-\-subclades\fR N_SCL
-number of label levels to be dislayed (starting from
+number of label levels to be displayed (starting from
 the leaves, \fB\-1\fR means all the levels, 1 is default )
 .TP
 \fB\-\-max_feature_len\fR MAX_FEATURE_LEN

debian/mans/run_lefse.1

@@ -46,7 +46,7 @@ max log ingluence of LDA coeff
 verbose execution (default 0)
 .TP
 \fB\-\-wilc\fR int
-wheter to perform the Wicoxon step (default 1)
+whether to perform the Wicoxon step (default 1)
 .TP
 \fB\-r\fR str
 select LDA or SVM for effect size (default LDA)

debian/patches/2to3.patch

+Description: 2to3 to port from python2 to python3
+Bug-Debian: https://bugs.debian.org/936836
+Author: Shayan Doust <hello@shayandoust.me>
+Last-Update: Mon, 09 Sep 2019 21:01:50 +0200
+
 Index: lefse/format_input.py
 ===================================================================
 --- lefse.orig/format_input.py	2019-09-10 20:26:24.056276041 +0100