New upstream version 1.7.4 (7be3d64a) · Commits · Debian Med / libbio-db-gff-perl

Changes

+4 −0

Original line number	Diff line number	Diff line
		Summary of important user-visible changes for Bio-DB-GFF
		--------------------------------------------------------

		1.7.4 2020-01-08 14:41:24-06:00 America/Chicago
		* Explicitly remove Bio::GMOD::CMap::Utils as a requirement, this is
		a non-CPAN module that is used in a loader script, so ignore.

		1.7.3 2019-02-19 14:12:42-05:00 America/Detroit
		* First release after split from bioperl-live.

LICENSE

+3 −3

Original line number	Diff line number	Diff line
		This software is copyright (c) 2019 by See individual modules.
		This software is copyright (c) 2020 by See individual modules.

		This is free software; you can redistribute it and/or modify it under
		the same terms as the Perl 5 programming language system itself.
		@@ -12,7 +12,7 @@ b) the "Artistic License"

		--- The GNU General Public License, Version 1, February 1989 ---

		This software is Copyright (c) 2019 by See individual modules.
		This software is Copyright (c) 2020 by See individual modules.

		This is free software, licensed under:

		@@ -272,7 +272,7 @@ That's all there is to it!

		--- The Artistic License 1.0 ---

		This software is Copyright (c) 2019 by See individual modules.
		This software is Copyright (c) 2020 by See individual modules.

		This is free software, licensed under:

META.json

+10 −11

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		@@ -4,7 +4,7 @@
		"See individual modules"
		],
		"dynamic_config" : 0,
		"generated_by" : "Dist::Zilla version 6.012, CPAN::Meta::Converter version 2.150005",
		"generated_by" : "Dist::Zilla version 6.012, CPAN::Meta::Converter version 2.150010",
		"license" : [
		"perl_5"
		],
		@@ -36,7 +36,6 @@
		"Bio::Das::FeatureTypeI" : "0",
		"Bio::Das::SegmentI" : "0",
		"Bio::DasI" : "0",
		"Bio::GMOD::CMap::Utils" : "0",
		"Bio::Location::Simple" : "0",
		"Bio::Location::Split" : "0",
		"Bio::LocationI" : "0",
		@@ -97,10 +96,10 @@
		"web" : "https://github.com/bioperl/bio-db-gff"
		}
		},
		"version" : "1.7.3",
		"version" : "1.7.4",
		"x_Dist_Zilla" : {
		"perl" : {
		"version" : "5.022001"
		"version" : "5.028001"
		},
		"plugins" : [
		{
		@@ -208,7 +207,7 @@
		"class" : "Dist::Zilla::Plugin::Test::Compile",
		"config" : {
		"Dist::Zilla::Plugin::Test::Compile" : {
		"bail_out_on_fail" : "0",
		"bail_out_on_fail" : 0,
		"fail_on_warning" : "author",
		"fake_home" : 0,
		"filename" : "t/00-compile.t",
		@@ -272,7 +271,7 @@
		"changelog" : "Changes"
		},
		"Dist::Zilla::Role::Git::Repo" : {
		"git_version" : "2.7.4",
		"git_version" : "2.20.1",
		"repo_root" : "."
		}
		},
		@@ -295,7 +294,7 @@
		"changelog" : "Changes"
		},
		"Dist::Zilla::Role::Git::Repo" : {
		"git_version" : "2.7.4",
		"git_version" : "2.20.1",
		"repo_root" : "."
		},
		"Dist::Zilla::Role::Git::StringFormatter" : {
		@@ -312,12 +311,12 @@
		"branch" : null,
		"changelog" : "Changes",
		"signed" : 0,
		"tag" : "Bio-DB-GFF-v1.7.3",
		"tag" : "Bio-DB-GFF-v1.7.4",
		"tag_format" : "%N-v%v",
		"tag_message" : "%N-v%v"
		},
		"Dist::Zilla::Role::Git::Repo" : {
		"git_version" : "2.7.4",
		"git_version" : "2.20.1",
		"repo_root" : "."
		},
		"Dist::Zilla::Role::Git::StringFormatter" : {
		@@ -381,12 +380,12 @@
		"zilla" : {
		"class" : "Dist::Zilla::Dist::Builder",
		"config" : {
		"is_trial" : "0"
		"is_trial" : 0
		},
		"version" : "6.012"
		}
		},
		"x_generated_by_perl" : "v5.22.1",
		"x_generated_by_perl" : "v5.28.1",
		"x_serialization_backend" : "Cpanel::JSON::XS version 4.09"
		}

META.yml

+9 −10

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		@@ -13,7 +13,7 @@ build_requires:
		configure_requires:
		ExtUtils::MakeMaker: '0'
		dynamic_config: 0
		generated_by: 'Dist::Zilla version 6.012, CPAN::Meta::Converter version 2.150005'
		generated_by: 'Dist::Zilla version 6.012, CPAN::Meta::Converter version 2.150010'
		license: perl
		meta-spec:
		url: http://module-build.sourceforge.net/META-spec-v1.4.html
		@@ -29,7 +29,6 @@ requires:
		Bio::Das::FeatureTypeI: '0'
		Bio::Das::SegmentI: '0'
		Bio::DasI: '0'
		Bio::GMOD::CMap::Utils: '0'
		Bio::Location::Simple: '0'
		Bio::Location::Split: '0'
		Bio::LocationI: '0'
		@@ -67,10 +66,10 @@ resources:
		bugtracker: https://github.com/bioperl/bio-db-gff/issues
		homepage: https://metacpan.org/release/Bio-DB-GFF
		repository: git://github.com/bioperl/bio-db-gff.git
		version: 1.7.3
		version: 1.7.4
		x_Dist_Zilla:
		perl:
		version: '5.022001'
		version: '5.028001'
		plugins:
		-
		class: Dist::Zilla::Plugin::GatherDir
		@@ -206,7 +205,7 @@ x_Dist_Zilla:
		allow_dirty_match: []
		changelog: Changes
		Dist::Zilla::Role::Git::Repo:
		git_version: 2.7.4
		git_version: 2.20.1
		repo_root: .
		name: '@BioPerl/Git::Check'
		version: '2.045'
		@@ -223,7 +222,7 @@ x_Dist_Zilla:
		allow_dirty_match: []
		changelog: Changes
		Dist::Zilla::Role::Git::Repo:
		git_version: 2.7.4
		git_version: 2.20.1
		repo_root: .
		Dist::Zilla::Role::Git::StringFormatter:
		time_zone: local
		@@ -236,11 +235,11 @@ x_Dist_Zilla:
		branch: ~
		changelog: Changes
		signed: 0
		tag: Bio-DB-GFF-v1.7.3
		tag: Bio-DB-GFF-v1.7.4
		tag_format: '%N-v%v'
		tag_message: '%N-v%v'
		Dist::Zilla::Role::Git::Repo:
		git_version: 2.7.4
		git_version: 2.20.1
		repo_root: .
		Dist::Zilla::Role::Git::StringFormatter:
		time_zone: local
		@@ -291,5 +290,5 @@ x_Dist_Zilla:
		config:
		is_trial: '0'
		version: '6.012'
		x_generated_by_perl: v5.22.1
		x_serialization_backend: 'YAML::Tiny version 1.69'
		x_generated_by_perl: v5.28.1
		x_serialization_backend: 'YAML::Tiny version 1.73'

Makefile.PL

+1 −3

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		@@ -35,7 +35,6 @@ my %WriteMakefileArgs = (
		"Bio::Das::FeatureTypeI" => 0,
		"Bio::Das::SegmentI" => 0,
		"Bio::DasI" => 0,
		"Bio::GMOD::CMap::Utils" => 0,
		"Bio::Location::Simple" => 0,
		"Bio::Location::Split" => 0,
		"Bio::LocationI" => 0,
		@@ -78,7 +77,7 @@ my %WriteMakefileArgs = (
		"Module::Build" => 0,
		"Test::More" => 0
		},
		"VERSION" => "1.7.3",
		"VERSION" => "1.7.4",
		"test" => {
		"TESTS" => "t/*.t"
		}
		@@ -95,7 +94,6 @@ my %FallbackPrereqs = (
		"Bio::Das::FeatureTypeI" => 0,
		"Bio::Das::SegmentI" => 0,
		"Bio::DasI" => 0,
		"Bio::GMOD::CMap::Utils" => 0,
		"Bio::Location::Simple" => 0,
		"Bio::Location::Split" => 0,
		"Bio::LocationI" => 0,