debian/changelog

-libsmithwaterman (0.0+git20160702.2610e25-5) UNRELEASED; urgency=medium
+libsmithwaterman (0.0+git20160702.2610e25-5) unstable; urgency=medium
 
   * Mark some symbols as optional to build with gcc-8
     Closes: #897797
+  * Make sure the lib is build before the binary (thanks to Andrey
+    Rahmatullin and Dan Kegel)
+  * Standards-Version: 4.2.0
+  * Lintian override for strange false positive
+    symbols-file-contains-current-version-with-debian-revision
 
- -- Andreas Tille <tille@debian.org>  Sun, 05 Aug 2018 05:21:24 +0200
+ -- Andreas Tille <tille@debian.org>  Sun, 05 Aug 2018 17:35:49 +0200
 
 libsmithwaterman (0.0+git20160702.2610e25-4) unstable; urgency=medium
 

debian/control

@@ -6,7 +6,7 @@ Priority: optional
 Build-Depends: debhelper (>= 11~),
                d-shlibs,
                libdisorder-dev
-Standards-Version: 4.1.4
+Standards-Version: 4.2.0
 Vcs-Browser: https://salsa.debian.org/med-team/libsmithwaterman
 Vcs-Git: https://salsa.debian.org/med-team/libsmithwaterman.git
 Homepage: https://github.com/ekg/smithwaterman

debian/libsmithwaterman0.lintian-overrides

+# Now idea how this false warning came up - can not even find that symbol and there is no Debian revision on any of the symbols
+libsmithwaterman0: symbols-file-contains-current-version-with-debian-revision on symbol _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS7_EESJ_IJEEEEESt17_Rb_tree_iteratorIS8_ESt23_Rb_tree_const_iteratorIS8_EDpOT_@Base
+

debian/patches/autoconf.patch

@@ -16,7 +16,7 @@ Description: Add autoconf stuff to enable simple library creation
 +
 +bin_PROGRAMS = smithwaterman
 +smithwaterman_SOURCES = smithwaterman.cpp
-+LDADD = -lsmithwaterman -ldisorder
++smithwaterman_LDADD = libsmithwaterman.la -ldisorder
 +
 +pkgconfigdir=$(libdir)/pkgconfig
 +pkgconfig_DATA = libsmithwaterman.pc