Verified Commit 6f269a28 authored by Michael R. Crusoe's avatar Michael R. Crusoe 🏳️‍🌈
Browse files

Add hardening patch & ship symbols

parent 48576796

debian/changelog

+9 −2
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libtabixpp (1.0.0-5) UNRELEASED; urgency=medium

libtabixpp (1.0.0-5) unstable; urgency=medium



  * Team upload.



  [ Jelmer Vernooij ]

  * Use secure copyright file specification URI.



 -- Jelmer Vernooij <jelmer@debian.org>  Fri, 26 Oct 2018 01:55:52 +0000

  [ Michael R. Crusoe ]

  * Add patch to enable hardening.

  * Ship libtabixpp.symbols



 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Fri, 13 Dec 2019 17:07:38 +0100



libtabixpp (1.0.0-4) unstable; urgency=medium

debian/control

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@@ -32,11 +32,11 @@ Package: libtabixpp-dev 
Architecture: any

Multi-Arch: same

Section: libdevel

Depends: ${shlibs:Depends},

         ${misc:Depends},

Depends: ${misc:Depends},

         libtabixpp0 (= ${binary:Version}),

         libhts-dev,

         zlib1g-dev

         zlib1g-dev,

         ${devlibs:Depends}

Pre-Depends: ${misc:Pre-Depends}

Provides: libtabixpp-dev

Description: C++ wrapper to tabix indexer (development files)

debian/libtabixpp0.symbols

0 → 100644
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libtabixpp.so.0 libtabixpp0 #MINVER#

 _ZN5Tabix11getNextLineERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.0.0

 _ZN5Tabix9getHeaderERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.0.0

 _ZN5Tabix9setRegionERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.0.0

 _ZN5TabixC1ERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.0.0

 _ZN5TabixC1Ev@Base 1.0.0

 _ZN5TabixC2ERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 1.0.0

 _ZN5TabixC2Ev@Base 1.0.0

 _ZN5TabixD1Ev@Base 1.0.0

 _ZN5TabixD2Ev@Base 1.0.0

 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 1.0.0

debian/patches/hardening

0 → 100644
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Author: Michael R. Crusoe <michael.crusoe@gmail.com>

Description: enable hardening flags passthrough

--- libtabixpp.orig/Makefile

+++ libtabixpp/Makefile

@@ -17,12 +17,12 @@

 .SUFFIXES:.c .o

 

 .c.o:

-	$(CC) -c $(CXXFLAGS) $(DFLAGS) $(INCLUDES) $< -o $@

+	$(CC) $(CPPFLAGS) -c $(CXXFLAGS) $(DFLAGS) $(INCLUDES) $< -o $@

 

 all:	$(PROG) libtabixpp.so.$(SONUMBER) libtabixpp.a

 

 tabix.o: tabix.cpp tabix.hpp

-	$(CXX) $(CXXFLAGS) -c tabix.cpp $(INCLUDES)

+	$(CXX) $(CPPFLAGS) $(CXXFLAGS) -c tabix.cpp $(INCLUDES)

 

 libtabixpp.a: tabix.o

 	ar rcs $@ $<

@@ -31,7 +31,7 @@

 	$(CXX) -shared -o $@ $< -fPIC -Wl,-soname,libtabixpp.so.$(SONUMBER) $(LDFLAGS) -lhts

 

 tabix++: tabix.o main.cpp

-	$(CXX) $(CXXFLAGS) -o $@ main.cpp tabix.o $(INCLUDES) $(LIBPATH) \

+	$(CXX) $(LDFLAGS) $(CPPFLAGS) $(CXXFLAGS) -o $@ main.cpp tabix.o $(INCLUDES) $(LIBPATH) \

 		-lhts -lpthread -lm -lz

 

 cleanlocal:

debian/patches/series

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build_shared_lib_with_debian_htslib.patch

hardening