Loading .github/ISSUE_TEMPLATE/bug_report.md 0 → 100644 +29 −0 Original line number Diff line number Diff line --- name: Bug report about: Create a report to help us improve title: 'Bug: ' labels: 'Bug Report' assignees: '' --- **Describe the bug** A clear and concise description of what the bug is. **To Reproduce** Steps to reproduce the behavior. If possible, could you share the data with us? **Expected behavior** A clear and concise description of what you expected to happen. **Screenshots** If applicable, add screenshots to help explain your problem. **System (please complete the following information):** - OS: [e.g. Linux, Mac OSX] - Python version [e.g. 3.7.1] - Numpy version [e.g. 1.17.0] - MACS Version [e.g. 2.2.4] **Additional context** Add any other context about the problem here. .github/ISSUE_TEMPLATE/feature_request.md 0 → 100644 +20 −0 Original line number Diff line number Diff line --- name: Feature request about: Suggest an idea for this project title: 'Feat: ' labels: 'Feature Request' assignees: '' --- **Is your feature request related to a problem? Please describe.** A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] **Describe the solution you'd like** A clear and concise description of what you want to happen. **Describe alternatives you've considered** A clear and concise description of any alternative solutions or features you've considered. **Additional context** Add any other context or screenshots about the feature request here. .github/ISSUE_TEMPLATE/general_question.md 0 → 100644 +20 −0 Original line number Diff line number Diff line --- name: General question about: Ask general questions on usage title: 'Q: ' labels: 'General Question' assignees: '' --- **Use case** A clear and concise description of what the use case is. For example: my data is from [...] **Describe the problem** A clear and concise description of what happend. **Describe the solution you tried** A clear and concise description of any solutions you've tried. **Additional context** Add any other context or screenshots about your use case here. .gitignore 0 → 100644 +33 −0 Original line number Diff line number Diff line MANIFEST build/* dist/* *.pyc .pydevproject .project *~ *.log .coverage coverage.xml \#*\# test/*.wig test/*.bed test/log test/test*_run_* test/subcommandstest_run_* test/__pycache__ test/*.prof test/*.tottime test/*.calls test/*.cumulative .DS_Store .cache test/NOSPMR.ppois.bdg_ppois.bdg test/*_run_* MACS2.egg-info .pytest_cache .cache .travis.yml 0 → 100644 +27 −0 Original line number Diff line number Diff line language: python python: - "3.7" - "3.6" - "3.5" install: - pip install --upgrade pip - pip install --upgrade -r requirements.txt - python setup.py install script: - pytest --cov-report term --cov=test/ - cd test - ./cmdlinetest macs2 - cd .. deploy: provider: pypi user: secure: 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 password: secure: 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 on: tags: true skip_existing: true distributions: sdist after_success: - codecov No newline at end of file Loading
.github/ISSUE_TEMPLATE/bug_report.md 0 → 100644 +29 −0 Original line number Diff line number Diff line --- name: Bug report about: Create a report to help us improve title: 'Bug: ' labels: 'Bug Report' assignees: '' --- **Describe the bug** A clear and concise description of what the bug is. **To Reproduce** Steps to reproduce the behavior. If possible, could you share the data with us? **Expected behavior** A clear and concise description of what you expected to happen. **Screenshots** If applicable, add screenshots to help explain your problem. **System (please complete the following information):** - OS: [e.g. Linux, Mac OSX] - Python version [e.g. 3.7.1] - Numpy version [e.g. 1.17.0] - MACS Version [e.g. 2.2.4] **Additional context** Add any other context about the problem here.
.github/ISSUE_TEMPLATE/feature_request.md 0 → 100644 +20 −0 Original line number Diff line number Diff line --- name: Feature request about: Suggest an idea for this project title: 'Feat: ' labels: 'Feature Request' assignees: '' --- **Is your feature request related to a problem? Please describe.** A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] **Describe the solution you'd like** A clear and concise description of what you want to happen. **Describe alternatives you've considered** A clear and concise description of any alternative solutions or features you've considered. **Additional context** Add any other context or screenshots about the feature request here.
.github/ISSUE_TEMPLATE/general_question.md 0 → 100644 +20 −0 Original line number Diff line number Diff line --- name: General question about: Ask general questions on usage title: 'Q: ' labels: 'General Question' assignees: '' --- **Use case** A clear and concise description of what the use case is. For example: my data is from [...] **Describe the problem** A clear and concise description of what happend. **Describe the solution you tried** A clear and concise description of any solutions you've tried. **Additional context** Add any other context or screenshots about your use case here.
.gitignore 0 → 100644 +33 −0 Original line number Diff line number Diff line MANIFEST build/* dist/* *.pyc .pydevproject .project *~ *.log .coverage coverage.xml \#*\# test/*.wig test/*.bed test/log test/test*_run_* test/subcommandstest_run_* test/__pycache__ test/*.prof test/*.tottime test/*.calls test/*.cumulative .DS_Store .cache test/NOSPMR.ppois.bdg_ppois.bdg test/*_run_* MACS2.egg-info .pytest_cache .cache
.travis.yml 0 → 100644 +27 −0 Original line number Diff line number Diff line language: python python: - "3.7" - "3.6" - "3.5" install: - pip install --upgrade pip - pip install --upgrade -r requirements.txt - python setup.py install script: - pytest --cov-report term --cov=test/ - cd test - ./cmdlinetest macs2 - cd .. deploy: provider: pypi user: secure: 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 password: secure: 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 on: tags: true skip_existing: true distributions: sdist after_success: - codecov No newline at end of file
