Commit c24e551d authored by Sascha Steinbiss's avatar Sascha Steinbiss
Browse files

New upstream version 2.2.2+dfsg

parent ce181de8

src/mash/Sketch.cpp

+4 −2
Original line number Diff line number Diff line
@@ -534,17 +534,19 @@ void addMinHashes(MinHashHeap & minHashHeap, char * seq, uint64_t length, const 
        reverseComplement(seq, seqRev, length);

    }

    

    uint64_t j = 0;

    

    for ( uint64_t i = 0; i < length - kmerSize + 1; i++ )

    {

		// repeatedly skip kmers with bad characters

		//

		bool bad = false;

		//

		for ( uint64_t j = i; j < i + kmerSize && i + kmerSize <= length; j++ )

		for ( ; j < i + kmerSize && i + kmerSize <= length; j++ )

		{

			if ( ! parameters.alphabet[seq[j]] )

			{

				i = j; // skip to past the bad character

				i = j++; // skip to past the bad character

				bad = true;

				break;

			}

src/mash/version.h

+1 −1
Original line number Diff line number Diff line
@@ -4,4 +4,4 @@ 
//

// See the LICENSE.txt file included with this software for license information.



static const char * version = "2.2";
 
static const char * version = "2.2.2";