Latest push with respect to testing

test usr/share/doc/mindthegap/examples

data usr/share/doc/mindthegap/examples

scripts usr/share/doc/mindthegap

test/scripts usr/share/doc/mindthegap

test/vde.py usr/share/doc/mindthegap

test/contig_test/README usr/share/doc/mindthegap/contig_test

test/full_test/README usr/share/doc/mindthegap/full_test

test/reads usr/share/mindthegap/test

test/references usr/share/mindthegap/test

test/truths usr/share/mindthegap/test

test/*.sh usr/share/mindthegap/test

test/eval.cpp usr/share/mindthegap/test

test/contig_test/*.fasta usr/share/mindthegap/test/contig_test

test/contig_test/*.info.txt usr/share/mindthegap/test/contig_test

test/contig_test/*gfa usr/share/mindthegap/test/contig_test

test/contig_test/*.log usr/share/mindthegap/test/contig_test

test/full_test/*.fasta usr/share/mindthegap/test/full_test

test/full_test/*.breakpoints usr/share/mindthegap/test/full_test

test/full_test/*.output usr/share/mindthegap/test/full_test

test/full_test/*.*.vcf usr/share/mindthegap/test/full_test

data usr/share/mindthegap

CHANGELOG.md usr/share/doc/mindthegap

README.md usr/share/doc/mindthegap

debian/tmp/usr/bin/MindTheGap usr/bin

if [ "${AUTOPKGTEST_TMP}" = "" ] ; then

  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)

  # Double quote below to expand the temporary directory variable now versus

  # later is on purpose.

  # shellcheck disable=SC2064

  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM

fi

cp -r /usr/share/mindthegap/test "${AUTOPKGTEST_TMP}"

cp -r /usr/share/mindthegap/data "${AUTOPKGTEST_TMP}"

cp -r /usr/share/doc/mindthegap/examples "${AUTOPKGTEST_TMP}"

cd "${AUTOPKGTEST_TMP}"/test

cd "${AUTOPKGTEST_TMP}"/examples/test

#do_stuff_to_test_package#

echo "Invoking simple_test.sh:"

bash simple_test.sh

echo "Invoking simple_full_test.sh:"