Commit 777af403 authored by Olivier Sallou's avatar Olivier Sallou
Browse files

New upstream version 2.9.0

parent 61579cd4

c++/compilers/unix/GCC.sh

+9 −4
Original line number Diff line number Diff line
@@ -3,7 +3,7 @@ 
# Setup the local working environment for the "configure" script

#   Compiler:   GCC

#

# $Revision: 491630 $  // by Denis Vakatov, NCBI (vakatov@ncbi.nlm.nih.gov)

# $Revision: 578209 $  // by Denis Vakatov, NCBI (vakatov@ncbi.nlm.nih.gov)

#############################################################################
@@ -51,11 +51,16 @@ case "$1" in 
     elif test "`$CXX -V$1 -dumpversion 2>/dev/null`" = "$1"; then

       CXX="$CXX -V$1"

       CC="$CC -V$1"

     elif test "`$CXX -dumpversion 2>/dev/null`" \!= "$1"; then

     else

       case "`$CXX -dumpversion 2>/dev/null`" in

         "$1" | "$1".* ) ;;

         * )

           cat <<EOF

ERROR:  cannot find GCC version $1; you may need to adjust PATH explicitly.

EOF

           exit 1

           ;;

       esac

     fi

     shift

  ;;

c++/compilers/vs2015/datatool.bat

+3 −3
Original line number Diff line number Diff line 
@echo off

REM $Id: datatool.bat 532246 2017-04-03 15:48:07Z gouriano $

REM $Id: datatool.bat 577623 2019-01-07 18:13:55Z ivanov $

REM ===========================================================================

REM 

REM                            PUBLIC DOMAIN NOTICE
@@ -66,8 +66,8 @@ for /f %%a in ('xcopy "%input_asn_path%" "%dest_spec%" /q /d /y') do (set copied 
set copied_def=0

if not exist "%input_def_path%" echo [-] > "%input_def_path%"

if exist "%input_def_path%" for /f %%a in ('xcopy "%input_def_path%" "%dest_spec%" /q /d /y') do (set copied_def=%%a)

if not %copied_asn%==0 goto DOGENERATE

if not %copied_def%==0 goto DOGENERATE

if not "%copied_asn%"=="0" goto DOGENERATE

if not "%copied_def%"=="0" goto DOGENERATE

if not exist "%src_subtree%%input_asn_name%.files"   goto DOGENERATE

if not exist "%src_subtree%%input_asn_name%__.cpp"   goto DOGENERATE

if not exist "%src_subtree%%input_asn_name%___.cpp"  goto DOGENERATE

c++/compilers/vs2015/install.sh

+1 −6
Original line number Diff line number Diff line 
#! /bin/sh

# $Id: install.sh 561966 2018-04-16 13:07:35Z ivanov $

# $Id: install.sh 577506 2019-01-04 18:39:23Z ivanov $

# Authors:  Denis Vakatov    (vakatov@ncbi.nlm.nih.gov)

#           Anton Lavrentiev (lavr@ncbi.nlm.nih.gov)

#
@@ -34,7 +34,6 @@ echo "[`basename $script`] NCBI C++: \"$builddir\" to \"$target\"..." 




# Derive the destination dirs

docdir="$target"/doc

scriptdir="$target"/scripts

incdir="$target"/include

srcdir="$target"/src
@@ -67,10 +66,6 @@ makedir "$target" -p 
makedir "$tmpdir" -p





# Documentation

echo "[`basename $script`] Installing documentation..."

install "$builddir/doc" "$docdir"



# Scripts

echo "[`basename $script`] Installing scripts..."

install "$builddir/scripts" "$scriptdir"

c++/compilers/vs2017/datatool.bat

+3 −3
Original line number Diff line number Diff line 
@echo off

REM $Id: datatool.bat 555778 2018-01-23 16:47:32Z gouriano $

REM $Id: datatool.bat 577623 2019-01-07 18:13:55Z ivanov $

REM ===========================================================================

REM 

REM                            PUBLIC DOMAIN NOTICE
@@ -66,8 +66,8 @@ for /f %%a in ('xcopy "%input_asn_path%" "%dest_spec%" /q /d /y') do (set copied 
set copied_def=0

if not exist "%input_def_path%" echo [-] > "%input_def_path%"

if exist "%input_def_path%" for /f %%a in ('xcopy "%input_def_path%" "%dest_spec%" /q /d /y') do (set copied_def=%%a)

if not %copied_asn%==0 goto DOGENERATE

if not %copied_def%==0 goto DOGENERATE

if not "%copied_asn%"=="0" goto DOGENERATE

if not "%copied_def%"=="0" goto DOGENERATE

if not exist "%src_subtree%%input_asn_name%.files"   goto DOGENERATE

if not exist "%src_subtree%%input_asn_name%__.cpp"   goto DOGENERATE

if not exist "%src_subtree%%input_asn_name%___.cpp"  goto DOGENERATE

c++/compilers/vs2017/install.sh

+1 −6
Original line number Diff line number Diff line 
#! /bin/sh

# $Id: install.sh 561966 2018-04-16 13:07:35Z ivanov $

# $Id: install.sh 577506 2019-01-04 18:39:23Z ivanov $

# Authors:  Denis Vakatov    (vakatov@ncbi.nlm.nih.gov)

#           Anton Lavrentiev (lavr@ncbi.nlm.nih.gov)

#
@@ -34,7 +34,6 @@ echo "[`basename $script`] NCBI C++: \"$builddir\" to \"$target\"..." 




# Derive the destination dirs

docdir="$target"/doc

scriptdir="$target"/scripts

incdir="$target"/include

srcdir="$target"/src
@@ -67,10 +66,6 @@ makedir "$target" -p 
makedir "$tmpdir" -p





# Documentation

echo "[`basename $script`] Installing documentation..."

install "$builddir/doc" "$docdir"



# Scripts

echo "[`basename $script`] Installing scripts..."

install "$builddir/scripts" "$scriptdir"