Commit 95a5a137 authored by Liubov Chuprikova's avatar Liubov Chuprikova
Browse files

Added copyright and license for the test data files, except one

parent 30d017ce

debian/copyright

+16 −17
Original line number Diff line number Diff line
@@ -4,7 +4,7 @@ Upstream-Name: ncbi 
Source: http://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/



Files: *

Copyright: 1996-2017 NCBI

Copyright: 1996-2018 NCBI

License: public_domain



Files: debian/*
@@ -13,33 +13,32 @@ Copyright: 1998-1999 Stephane Bortzmeyer <bortzmeyer@pasteur.fr> 
           2001-2017 Aaron M. Ucko <ucko@debian.org>

License: public_domain



Files: debian/tests/test-data/nc0225.aso.gz

       debian/tests/test-data/dsRNA_viruses.*

Files: debian/tests/test-data/* (except for trnascan-se_sample.output)

Copyright: 1996-2018 NCBI

License: public_domain

Comment:

 To dowload the files use:

 nc0225.aso.gz and dsRNA_viruses.* can be dowloaded by running:

    wget ftp://ftp.ncbi.nih.gov/ncbi-asn1/daily-nc/nc0225.aso.gz

    wget ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/ASN_BINARY/Viruses/dsRNA_viruses.ags.gz

    wget ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/GENE_INFO/Viruses/dsRNA_viruses.gene_info.gz



Files: debian/tests/test-data/spidey_*

Comment:

 The sequences can be downloaded using their accession numbers with help of idfetch, e.g.:

 .

 spidey_* can be downloaded using their accession numbers with help of idfetch, e.g.:

    idfetch -dn -t 5 -c 1 -g 1327850419 -o spidey_mRNA.fasta

    idfetch -dn -t 5 -c 1 -g 568802167 -o spidey_genome.fasta

 .

 Sc_16.sbt was generated by NCBI Submission Portal:

    https://submit.ncbi.nlm.nih.gov/genbank/template/submission/

 .

 The examples for Sc_16.fsa and Sc_16.tbl were taken from here:

    https://www.ncbi.nlm.nih.gov/genbank/tbl2asn2/



Files: debian/tests/test-data/trnascan-se_sample.output

Copyright: ?

License: ?

Comment:

 The file was generated by tRNAscan-SE 2.0:

    tRNAscan-SE -d -y -o trnascan-se_sample.output /usr/share/doc/trnascan-se/examples/Example1.fa



Files: debian/tests/test-data/Sc_16.*

Comment:

 The example of a template file was generated by NCBI Submission Portal:

    https://submit.ncbi.nlm.nih.gov/genbank/template/submission/

 .

 The sequence and feature table examples were taken from here:

    https://www.ncbi.nlm.nih.gov/genbank/tbl2asn2/



License: public_domain

 The NCBI toolkit has been put into the public domain, completely unfettered:

 .