Use mh-make to get proper maven rules

Information about oncofuse

--------------------------

This package was debianized using the mh_make command

from the maven-debian-helper package.

The build system uses Maven but prevents it from downloading

anything from the Internet, making the build compliant with

the Debian policy.

oncofuse (1.1.1-1) UNRELEASED; urgency=medium

  * Initial release (Closes: #<bug>)

  TODO: empty binary package (need to run maven helper)

    TODO: [ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.8.0:compile (default-compile) on project oncofuse: No such compiler 'groovy-eclipse-compiler'.

 -- Andreas Tille <tille@debian.org>  Sat, 27 Apr 2019 07:20:42 +0200

 -- Andreas Tille <tille@debian.org>  Wed, 26 Jun 2019 15:28:45 +0200

Uploaders: Andreas Tille <tille@debian.org>

Section: science

Priority: optional

Build-Depends: debhelper (>= 12~)

Build-Depends: debhelper (>= 12~),

               default-jdk,

               maven-debian-helper (>= 2.1)

Build-Depends-Indep: groovy,

                     libcommons-cli-java,

                     libgpars-groovy-java (>= 1.2.1),

                     libmaven-antrun-plugin-java (>= 1.8),

                     libmaven-shade-plugin-java (>= 3.1.1) 

Standards-Version: 4.3.0

Vcs-Browser: https://salsa.debian.org/med-team/oncofuse

Vcs-Git: https://salsa.debian.org/med-team/oncofuse.git

Homepage: https://github.com/mikessh/oncofuse

Package: oncofuse

Architecture: any

Depends: ${shlibs:Depends},

         ${misc:Depends}

Architecture: all

Depends: ${misc:Depends},

         ${maven:Depends}

Suggests: ${maven:OptionalDepends}

Description: predicting oncogenic potential of gene fusions

 Oncofuse is a framework designed to estimate the oncogenic potential of

 de-novo discovered gene fusions. It uses several hallmark features and

nz.ac.waikato.cms.weka weka-stable * * * *

org.codehaus.groovy groovy-eclipse-compiler * * * *