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Commits on Source (8)
debhelper 11
· f568773e
Andreas Tille
authored
Sep 07, 2018
f568773e
Point Vcs fields to salsa.debian.org
· b1579a2b
Andreas Tille
authored
Sep 07, 2018
b1579a2b
Standards-Version: 4.2.1
· a56b6a1b
Andreas Tille
authored
Sep 07, 2018
a56b6a1b
Spelling
· 9e6f809c
Andreas Tille
authored
Sep 07, 2018
9e6f809c
Respect DEB_BUILD_OPTIONS in override_dh_auto_test
· f8c40ef5
Andreas Tille
authored
Sep 07, 2018
f8c40ef5
Do not parse d/changelog
· 1cc82c87
Andreas Tille
authored
Sep 07, 2018
1cc82c87
Upload to unstable
· 3391671a
Andreas Tille
authored
Sep 07, 2018
3391671a
Really respect DEB_BUILD_OPTIONS
· 79ba5ee6
Andreas Tille
authored
Sep 07, 2018
79ba5ee6
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debian/changelog
View file @
79ba5ee6
pftools (3+dfsg-3)
UNRELEASED
; urgency=medium
pftools (3+dfsg-3)
unstable
; urgency=medium
[ Steffen Moeller ]
* debian/upsdtream/metadata:
- Pointed out that there are no references in registries
- yamllint cleanliness
-- Steffen Moeller <moeller@debian.org> Sat, 16 Sep 2017 16:41:54 +0200
[ Andreas Tille ]
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* d/rules:
- Respect DEB_BUILD_OPTIONS in override_dh_auto_test
- Do not parse d/changelog
-- Andreas Tille <tille@debian.org> Fri, 07 Sep 2018 13:05:57 +0200
pftools (3+dfsg-2) unstable; urgency=medium
...
...
debian/compat
View file @
79ba5ee6
1
0
1
1
debian/control
View file @
79ba5ee6
Source: pftools
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Build-Depends: debhelper (>= 10),
Section: science
Priority: optional
Build-Depends: debhelper (>= 11~),
gfortran,
autoconf-archive
Standards-Version:
3.9.8
Vcs-Browser: https://
anonscm
.debian.org/
cgit/debian-med
/pftools
.git
Vcs-Git: https://
anonscm
.debian.org/
git/debian-med
/pftools.git
Standards-Version:
4.2.1
Vcs-Browser: https://
salsa
.debian.org/
med-team
/pftools
Vcs-Git: https://
salsa
.debian.org/
med-team
/pftools.git
Homepage: http://web.expasy.org/pftools/
Package: pftools
Architecture: any-amd64
Depends: ${shlibs:Depends}, ${misc:Depends}
Depends: ${shlibs:Depends},
${misc:Depends}
Description: build and search protein and DNA generalized profiles
The pftools package contains all the software necessary to build protein
and DNA generalized profiles and use them to scan and align sequences,
...
...
debian/patches/fix_test_output.patch
View file @
79ba5ee6
...
...
@@ -2,7 +2,7 @@ Author: Andreas Tille <tille@debian.org>
Last-Update: Tue, 21 Mar 2017 22:14:51 +0100
Description: The test output seems to be created with pftools 2.3 and the
output format has changed in version 3. This patch adapts to slight
formating changes (as well as the dropped PATH from test script).
format
t
ing changes (as well as the dropped PATH from test script).
.
Note: There are more relevant differences than just spacing which are
not fixed in this patch.
...
...
debian/rules
View file @
79ba5ee6
...
...
@@ -2,7 +2,7 @@
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
include /usr/share/dpkg/default.mk
%:
dh $@
...
...
@@ -10,21 +10,22 @@ DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
override_dh_auto_install:
dh_auto_install
# Avoid name spacing conflict with htop and consequently also rename gtop
mv debian/$(DEB
PKGNAM
E)/usr/bin/gtop debian/$(DEB
PKGNAM
E)/usr/bin/pfgtop
mv debian/$(DEB
PKGNAM
E)/usr/bin/htop debian/$(DEB
PKGNAM
E)/usr/bin/pfhtop
mv debian/$(DEB
_SOURC
E)/usr/bin/gtop debian/$(DEB
_SOURC
E)/usr/bin/pfgtop
mv debian/$(DEB
_SOURC
E)/usr/bin/htop debian/$(DEB
_SOURC
E)/usr/bin/pfhtop
override_dh_installman:
dh_installman
mv debian/$(DEB
PKGNAM
E)/usr/share/man/man1/gtop.1 debian/$(DEB
PKGNAM
E)/usr/share/man/man1/pfgtop.1
mv debian/$(DEB
PKGNAM
E)/usr/share/man/man1/htop.1 debian/$(DEB
PKGNAM
E)/usr/share/man/man1/pfhtop.1
mv debian/$(DEB
_SOURC
E)/usr/share/man/man1/gtop.1 debian/$(DEB
_SOURC
E)/usr/share/man/man1/pfgtop.1
mv debian/$(DEB
_SOURC
E)/usr/share/man/man1/htop.1 debian/$(DEB
_SOURC
E)/usr/share/man/man1/pfhtop.1
override_dh_installexamples:
dh_installexamples
sed -i \
-e 's:^\([gh]top\) :pf\1 :' \
debian/$(DEB
PKGNAM
E)/usr/share/doc/$(DEB
PKGNAM
E)/examples/test.sh
debian/$(DEB
_SOURC
E)/usr/share/doc/$(DEB
_SOURC
E)/examples/test.sh
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
dh_auto_test
export PATH=$(CURDIR)/src/Fortran/:$(PATH) ; \
echo $${PATH} ; \
...
...
@@ -34,3 +35,4 @@ override_dh_auto_test:
-e '/^DT */d' > test.build ; \
grep -v '^DT *' test.out > test.compare ; \
diff -u test.compare test.build || true
endif