software for finding CRISPR repeats

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debian Loading commit data...
Makefile Loading commit data...
acceptaa.cpp Loading commit data...
accepthit.cpp Loading commit data...
alignarrays.cpp Loading commit data...
alignclust.cpp Loading commit data...
alignprofs.cpp Loading commit data...
aligntraps.cpp Loading commit data...
alnarray.cpp Loading commit data...
alngivenpath.cpp Loading commit data...
alpha.cpp Loading commit data...
assert.cpp Loading commit data...
bittb.cpp Loading commit data...
clustcons.cpp Loading commit data...
clustconsr.cpp Loading commit data...
cmp.cpp Loading commit data...
comp.cpp Loading commit data...
cons.cpp Loading commit data...
distcalc.cpp Loading commit data...
distcalc.h Loading commit data...
distfunc.cpp Loading commit data...
distfunc.h Loading commit data...
dp.cpp Loading commit data...
estring.cpp Loading commit data...
estring.h Loading commit data...
expandpiles.cpp Loading commit data...
filterb.cpp Loading commit data...
filterb2.cpp Loading commit data...
findarrays.cpp Loading commit data...
findpiles.cpp Loading commit data...
fixbounds.cpp Loading commit data...
forkmer.h Loading commit data...
getarraydata.cpp Loading commit data...
getccs.cpp Loading commit data...
getconsaa.cpp Loading commit data...
getgdtree.cpp Loading commit data...
getparams.cpp Loading commit data...
getsubseq.cpp Loading commit data...
glbalign.cpp Loading commit data...
hitstoimages.cpp Loading commit data...
info.cpp Loading commit data...
intlist.h Loading commit data...
kmerdist.cpp Loading commit data...
log.cpp Loading commit data...
logaa.cpp Loading commit data...
loghits.cpp Loading commit data...
main.cpp Loading commit data...
makecontigmap.cpp Loading commit data...
makegraph.cpp Loading commit data...
makeindex.cpp Loading commit data...
mem.cpp Loading commit data...
mergearrays.cpp Loading commit data...
mergefilterhits.cpp Loading commit data...
mk Loading commit data...
mkrootmsa.cpp Loading commit data...
msa.cpp Loading commit data...
msa.h Loading commit data...
multaln.cpp Loading commit data...
multaln.h Loading commit data...
myassert.h Loading commit data...
options.cpp Loading commit data...
outarray.cpp Loading commit data...
outdetail.cpp Loading commit data...
outdetailaa.cpp Loading commit data...
outlocalaln.cpp Loading commit data...
params.cpp Loading commit data...
params.h Loading commit data...
pilercr.cpp Loading commit data...
pilercr.h Loading commit data...
pilercr.vcxproj Loading commit data...
proffrommsa.cpp Loading commit data...
profile.h Loading commit data...
progaln.cpp Loading commit data...
progress.cpp Loading commit data...
progress.h Loading commit data...
pwpath.cpp Loading commit data...
pwpath.h Loading commit data...
quit.cpp Loading commit data...
readfilterhits.cpp Loading commit data...
readmfa.cpp Loading commit data...
revcomp.cpp Loading commit data...
savefhits.cpp Loading commit data...
savefilterhit.cpp Loading commit data...
saveseqs.cpp Loading commit data...
savetraps.cpp Loading commit data...
scoremx.cpp Loading commit data...
seq.cpp Loading commit data...
seq.h Loading commit data...
seqvect.cpp Loading commit data...
seqvect.h Loading commit data...
sw.h Loading commit data...
swsimple.cpp Loading commit data...
tbsw.cpp Loading commit data...
tree.cpp Loading commit data...
tree.h Loading commit data...
types.h Loading commit data...
upgma.cpp Loading commit data...
usage.cpp Loading commit data...
utils.cpp Loading commit data...
utils.h Loading commit data...
utils_linux.cpp Loading commit data...
utils_other.cpp Loading commit data...
utils_unix.cpp Loading commit data...
utils_win32.cpp Loading commit data...
validaa.cpp Loading commit data...
writearrays.cpp Loading commit data...
writegff.cpp Loading commit data...
writepiles.cpp Loading commit data...